Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
DTX3Q8N9I9 AC026471.6-201ENST00000622954 1905 ntBASIC18.65■□□□□ 0.58
DTX3Q8N9I9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DTX3Q8N9I9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.65■□□□□ 0.58
DTX3Q8N9I9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
DTX3Q8N9I9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DTX3Q8N9I9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.65■□□□□ 0.58
DTX3Q8N9I9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DTX3Q8N9I9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DTX3Q8N9I9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.65■□□□□ 0.58
DTX3Q8N9I9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
DTX3Q8N9I9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DTX3Q8N9I9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DTX3Q8N9I9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.64■□□□□ 0.57
DTX3Q8N9I9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
DTX3Q8N9I9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
DTX3Q8N9I9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.64■□□□□ 0.57
DTX3Q8N9I9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.64■□□□□ 0.57
DTX3Q8N9I9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DTX3Q8N9I9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DTX3Q8N9I9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
DTX3Q8N9I9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DTX3Q8N9I9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.64■□□□□ 0.57
DTX3Q8N9I9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DTX3Q8N9I9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 AC004687.1-201ENST00000579003 1625 ntBASIC18.63■□□□□ 0.57
DTX3Q8N9I9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DTX3Q8N9I9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DTX3Q8N9I9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.62■□□□□ 0.57
DTX3Q8N9I9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.62■□□□□ 0.57
DTX3Q8N9I9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.62■□□□□ 0.57
DTX3Q8N9I9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DTX3Q8N9I9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DTX3Q8N9I9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DTX3Q8N9I9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.62■□□□□ 0.57
DTX3Q8N9I9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
DTX3Q8N9I9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.62■□□□□ 0.57
DTX3Q8N9I9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DTX3Q8N9I9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DTX3Q8N9I9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
DTX3Q8N9I9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
DTX3Q8N9I9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
DTX3Q8N9I9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DTX3Q8N9I9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DTX3Q8N9I9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
DTX3Q8N9I9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DTX3Q8N9I9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DTX3Q8N9I9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DTX3Q8N9I9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DTX3Q8N9I9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DTX3Q8N9I9 AC008406.3-201ENST00000620001 1374 ntBASIC18.61■□□□□ 0.57
DTX3Q8N9I9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DTX3Q8N9I9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.61■□□□□ 0.57
DTX3Q8N9I9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
DTX3Q8N9I9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
DTX3Q8N9I9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DTX3Q8N9I9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DTX3Q8N9I9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
DTX3Q8N9I9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.6■□□□□ 0.57
DTX3Q8N9I9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DTX3Q8N9I9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DTX3Q8N9I9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
DTX3Q8N9I9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DTX3Q8N9I9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DTX3Q8N9I9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DTX3Q8N9I9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DTX3Q8N9I9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DTX3Q8N9I9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
DTX3Q8N9I9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.6■□□□□ 0.57
DTX3Q8N9I9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.6■□□□□ 0.57
DTX3Q8N9I9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.59■□□□□ 0.57
DTX3Q8N9I9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
DTX3Q8N9I9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
DTX3Q8N9I9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DTX3Q8N9I9 FEM1AP1-201ENST00000431297 1995 ntBASIC18.59■□□□□ 0.57
DTX3Q8N9I9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DTX3Q8N9I9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.59■□□□□ 0.57
DTX3Q8N9I9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DTX3Q8N9I9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DTX3Q8N9I9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.59■□□□□ 0.57
DTX3Q8N9I9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms