Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC71Q8IV32 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC71Q8IV32 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC71Q8IV32 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC71Q8IV32 IGHV3-19-201ENST00000521488 291 ntBASIC19.82■□□□□ 0.76
CCDC71Q8IV32 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC71Q8IV32 AC022517.1-201ENST00000592429 346 ntBASIC19.82■□□□□ 0.76
CCDC71Q8IV32 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.82■□□□□ 0.76
CCDC71Q8IV32 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC71Q8IV32 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC71Q8IV32 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC71Q8IV32 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC71Q8IV32 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
CCDC71Q8IV32 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 KRT18P5-201ENST00000436075 1291 ntBASIC19.81■□□□□ 0.76
CCDC71Q8IV32 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 AC010525.1-201ENST00000585559 441 ntBASIC19.81■□□□□ 0.76
CCDC71Q8IV32 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC71Q8IV32 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 DUX4L2-201ENST00000561772 1275 ntBASIC19.8■□□□□ 0.76
CCDC71Q8IV32 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 AL358852.1-201ENST00000623174 1268 ntBASIC19.8■□□□□ 0.76
CCDC71Q8IV32 DUX4L6-201ENST00000626483 1275 ntBASIC19.8■□□□□ 0.76
CCDC71Q8IV32 DUX4L1-201ENST00000627662 1275 ntBASIC19.8■□□□□ 0.76
CCDC71Q8IV32 DUX4L8-201ENST00000629013 1275 ntBASIC19.8■□□□□ 0.76
CCDC71Q8IV32 DUX4L3-201ENST00000630187 1275 ntBASIC19.8■□□□□ 0.76
CCDC71Q8IV32 DUX4L7-201ENST00000630678 1275 ntBASIC19.8■□□□□ 0.76
CCDC71Q8IV32 DUX4L5-201ENST00000630834 1275 ntBASIC19.8■□□□□ 0.76
CCDC71Q8IV32 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC71Q8IV32 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCDC71Q8IV32 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC71Q8IV32 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCDC71Q8IV32 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC71Q8IV32 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC71Q8IV32 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
CCDC71Q8IV32 MIR572-201ENST00000384983 95 ntBASIC19.79■□□□□ 0.76
CCDC71Q8IV32 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCDC71Q8IV32 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC71Q8IV32 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC71Q8IV32 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC71Q8IV32 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC71Q8IV32 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC71Q8IV32 FP325331.1-202ENST00000623531 1380 ntBASIC19.79■□□□□ 0.76
CCDC71Q8IV32 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC71Q8IV32 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC71Q8IV32 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC71Q8IV32 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC71Q8IV32 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms