Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BRAT1Q6PJG6 AC010542.4-201ENST00000563151 1910 ntBASIC21.28■■□□□ 1
BRAT1Q6PJG6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRAT1Q6PJG6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.28■■□□□ 1
BRAT1Q6PJG6 AC004911.1-201ENST00000416316 871 ntBASIC21.28■■□□□ 1
BRAT1Q6PJG6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.28■■□□□ 1
BRAT1Q6PJG6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.28■■□□□ 1
BRAT1Q6PJG6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRAT1Q6PJG6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRAT1Q6PJG6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRAT1Q6PJG6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRAT1Q6PJG6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRAT1Q6PJG6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.28■■□□□ 1
BRAT1Q6PJG6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BRAT1Q6PJG6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.27■■□□□ 1
BRAT1Q6PJG6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BRAT1Q6PJG6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.27■■□□□ 1
BRAT1Q6PJG6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.27■■□□□ 1
BRAT1Q6PJG6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
BRAT1Q6PJG6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
BRAT1Q6PJG6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.27■■□□□ 1
BRAT1Q6PJG6 AC008175.2-201ENST00000612840 297 ntBASIC21.27■■□□□ 1
BRAT1Q6PJG6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.27■■□□□ 1
BRAT1Q6PJG6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BRAT1Q6PJG6 C11orf96-202ENST00000528572 1834 ntBASIC21.27■□□□□ 0.99
BRAT1Q6PJG6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.27■□□□□ 0.99
BRAT1Q6PJG6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 BID-214ENST00000617586 542 ntTSL 5 BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.26■□□□□ 0.99
BRAT1Q6PJG6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRAT1Q6PJG6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRAT1Q6PJG6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRAT1Q6PJG6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRAT1Q6PJG6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRAT1Q6PJG6 POU5F1P4-201ENST00000413175 1085 ntBASIC21.25■□□□□ 0.99
BRAT1Q6PJG6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRAT1Q6PJG6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.25■□□□□ 0.99
BRAT1Q6PJG6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.25■□□□□ 0.99
BRAT1Q6PJG6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.25■□□□□ 0.99
BRAT1Q6PJG6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BRAT1Q6PJG6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
BRAT1Q6PJG6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.25■□□□□ 0.99
BRAT1Q6PJG6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
BRAT1Q6PJG6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 UBE2DNL-204ENST00000602536 740 ntBASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
BRAT1Q6PJG6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 AC120498.10-201ENST00000621827 505 ntBASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 MYCNOS-205ENST00000641950 531 ntBASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
BRAT1Q6PJG6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BRAT1Q6PJG6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BRAT1Q6PJG6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
BRAT1Q6PJG6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BRAT1Q6PJG6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BRAT1Q6PJG6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms