Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 DUX4L16-201ENST00000555130 1264 ntBASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.71■■□□□ 1.39
SWSAP1Q6NVH7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SWSAP1Q6NVH7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
SWSAP1Q6NVH7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
SWSAP1Q6NVH7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
SWSAP1Q6NVH7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
SWSAP1Q6NVH7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
SWSAP1Q6NVH7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
SWSAP1Q6NVH7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SWSAP1Q6NVH7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.7■■□□□ 1.38
SWSAP1Q6NVH7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.7■■□□□ 1.38
SWSAP1Q6NVH7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.7■■□□□ 1.38
SWSAP1Q6NVH7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
SWSAP1Q6NVH7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SWSAP1Q6NVH7 AC010542.4-201ENST00000563151 1910 ntBASIC23.7■■□□□ 1.38
SWSAP1Q6NVH7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SWSAP1Q6NVH7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SWSAP1Q6NVH7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SWSAP1Q6NVH7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SWSAP1Q6NVH7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.69■■□□□ 1.38
SWSAP1Q6NVH7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SWSAP1Q6NVH7 CROCCP5-201ENST00000436658 830 ntBASIC23.69■■□□□ 1.38
SWSAP1Q6NVH7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SWSAP1Q6NVH7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SWSAP1Q6NVH7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
SWSAP1Q6NVH7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.69■■□□□ 1.38
SWSAP1Q6NVH7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.69■■□□□ 1.38
SWSAP1Q6NVH7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.69■■□□□ 1.38
SWSAP1Q6NVH7 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.69■■□□□ 1.38
SWSAP1Q6NVH7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.69■■□□□ 1.38
SWSAP1Q6NVH7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.69■■□□□ 1.38
SWSAP1Q6NVH7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SWSAP1Q6NVH7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SWSAP1Q6NVH7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SWSAP1Q6NVH7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.68■■□□□ 1.38
SWSAP1Q6NVH7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
SWSAP1Q6NVH7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SWSAP1Q6NVH7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.68■■□□□ 1.38
SWSAP1Q6NVH7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.68■■□□□ 1.38
SWSAP1Q6NVH7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SWSAP1Q6NVH7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SWSAP1Q6NVH7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SWSAP1Q6NVH7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SWSAP1Q6NVH7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SWSAP1Q6NVH7 ID1-201ENST00000376105 1233 ntBASIC23.67■■□□□ 1.38
SWSAP1Q6NVH7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SWSAP1Q6NVH7 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.67■■□□□ 1.38
SWSAP1Q6NVH7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SWSAP1Q6NVH7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 AC008175.2-201ENST00000612840 297 ntBASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.66■■□□□ 1.38
SWSAP1Q6NVH7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SWSAP1Q6NVH7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SWSAP1Q6NVH7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SWSAP1Q6NVH7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SWSAP1Q6NVH7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
SWSAP1Q6NVH7 SLC7A5P1-201ENST00000568957 537 ntBASIC23.64■■□□□ 1.37
SWSAP1Q6NVH7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms