Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC33.07■■■□□ 2.88
CCDC18Q5T9S5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC33.07■■■□□ 2.88
CCDC18Q5T9S5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
CCDC18Q5T9S5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC33.07■■■□□ 2.88
CCDC18Q5T9S5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC33.07■■■□□ 2.88
CCDC18Q5T9S5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CCDC18Q5T9S5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CCDC18Q5T9S5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC33.06■■■□□ 2.88
CCDC18Q5T9S5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC33.06■■■□□ 2.88
CCDC18Q5T9S5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
CCDC18Q5T9S5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CCDC18Q5T9S5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC33.06■■■□□ 2.88
CCDC18Q5T9S5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC33.06■■■□□ 2.88
CCDC18Q5T9S5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC33.06■■■□□ 2.88
CCDC18Q5T9S5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CCDC18Q5T9S5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC33.05■■■□□ 2.88
CCDC18Q5T9S5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC33.05■■■□□ 2.88
CCDC18Q5T9S5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC33.05■■■□□ 2.88
CCDC18Q5T9S5 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CCDC18Q5T9S5 AC061975.6-201ENST00000579045 1553 ntBASIC33.05■■■□□ 2.88
CCDC18Q5T9S5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
CCDC18Q5T9S5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CCDC18Q5T9S5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 AC008694.1-202ENST00000636953 945 ntBASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CCDC18Q5T9S5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC33.03■■■□□ 2.88
CCDC18Q5T9S5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC33.03■■■□□ 2.88
CCDC18Q5T9S5 AC003102.1-202ENST00000563394 1796 ntBASIC33.03■■■□□ 2.88
CCDC18Q5T9S5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CCDC18Q5T9S5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC33.03■■■□□ 2.88
CCDC18Q5T9S5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC33.03■■■□□ 2.88
CCDC18Q5T9S5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC33.03■■■□□ 2.88
CCDC18Q5T9S5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC33.03■■■□□ 2.88
CCDC18Q5T9S5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CCDC18Q5T9S5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC33.03■■■□□ 2.88
CCDC18Q5T9S5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CCDC18Q5T9S5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
CCDC18Q5T9S5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC33.02■■■□□ 2.88
CCDC18Q5T9S5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC33.02■■■□□ 2.88
CCDC18Q5T9S5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC33.01■■■□□ 2.88
CCDC18Q5T9S5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
CCDC18Q5T9S5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC33.01■■■□□ 2.88
CCDC18Q5T9S5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC33.01■■■□□ 2.88
CCDC18Q5T9S5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC33.01■■■□□ 2.88
CCDC18Q5T9S5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC33.01■■■□□ 2.87
CCDC18Q5T9S5 AC127496.7-201ENST00000625110 1798 ntBASIC33.01■■■□□ 2.87
CCDC18Q5T9S5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC33■■■□□ 2.87
CCDC18Q5T9S5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC33■■■□□ 2.87
CCDC18Q5T9S5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC33■■■□□ 2.87
CCDC18Q5T9S5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC33■■■□□ 2.87
CCDC18Q5T9S5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 BX276092.2-201ENST00000417668 665 ntBASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 POU5F1P3-201ENST00000428824 1078 ntBASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 RARRES2P4-201ENST00000514074 484 ntBASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 AC010980.2-201ENST00000587099 1412 ntBASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 RNA5SP413-201ENST00000516373 109 ntBASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC32.99■■■□□ 2.87
CCDC18Q5T9S5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CCDC18Q5T9S5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
CCDC18Q5T9S5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC32.98■■■□□ 2.87
CCDC18Q5T9S5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CCDC18Q5T9S5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC32.98■■■□□ 2.87
CCDC18Q5T9S5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC32.98■■■□□ 2.87
CCDC18Q5T9S5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CCDC18Q5T9S5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC32.98■■■□□ 2.87
CCDC18Q5T9S5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
CCDC18Q5T9S5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
CCDC18Q5T9S5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC32.97■■■□□ 2.87
CCDC18Q5T9S5 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC32.97■■■□□ 2.87
CCDC18Q5T9S5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC32.97■■■□□ 2.87
CCDC18Q5T9S5 AL591742.1-201ENST00000604433 565 ntBASIC32.97■■■□□ 2.87
CCDC18Q5T9S5 ITM2C-210ENST00000620962 501 ntBASIC32.97■■■□□ 2.87
CCDC18Q5T9S5 AC066615.1-201ENST00000640911 628 ntBASIC32.97■■■□□ 2.87
CCDC18Q5T9S5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC32.97■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms