Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
SNAPC4Q5SXM2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC35.19■■■■□ 3.22
SNAPC4Q5SXM2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
SNAPC4Q5SXM2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
SNAPC4Q5SXM2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC35.19■■■■□ 3.22
SNAPC4Q5SXM2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC35.18■■■■□ 3.22
SNAPC4Q5SXM2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC35.18■■■■□ 3.22
SNAPC4Q5SXM2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
SNAPC4Q5SXM2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
SNAPC4Q5SXM2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
SNAPC4Q5SXM2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC35.18■■■■□ 3.22
SNAPC4Q5SXM2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC35.18■■■■□ 3.22
SNAPC4Q5SXM2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC35.18■■■■□ 3.22
SNAPC4Q5SXM2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC35.18■■■■□ 3.22
SNAPC4Q5SXM2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
SNAPC4Q5SXM2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC35.17■■■■□ 3.22
SNAPC4Q5SXM2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC35.17■■■■□ 3.22
SNAPC4Q5SXM2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC35.17■■■■□ 3.22
SNAPC4Q5SXM2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC35.17■■■■□ 3.22
SNAPC4Q5SXM2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC35.17■■■■□ 3.22
SNAPC4Q5SXM2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
SNAPC4Q5SXM2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC35.17■■■■□ 3.22
SNAPC4Q5SXM2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
SNAPC4Q5SXM2 AC020928.2-201ENST00000588717 2197 ntBASIC35.17■■■■□ 3.22
SNAPC4Q5SXM2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC35.16■■■■□ 3.22
SNAPC4Q5SXM2 KRT18P21-201ENST00000515767 1272 ntBASIC35.16■■■■□ 3.22
SNAPC4Q5SXM2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
SNAPC4Q5SXM2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
SNAPC4Q5SXM2 AC243732.1-201ENST00000612648 864 ntBASIC35.16■■■■□ 3.22
SNAPC4Q5SXM2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC35.16■■■■□ 3.22
SNAPC4Q5SXM2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
SNAPC4Q5SXM2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
SNAPC4Q5SXM2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
SNAPC4Q5SXM2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC35.16■■■■□ 3.22
SNAPC4Q5SXM2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC35.16■■■■□ 3.22
SNAPC4Q5SXM2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC35.16■■■■□ 3.22
SNAPC4Q5SXM2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC35.15■■■■□ 3.22
SNAPC4Q5SXM2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
SNAPC4Q5SXM2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC35.15■■■■□ 3.22
SNAPC4Q5SXM2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC35.15■■■■□ 3.22
SNAPC4Q5SXM2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC35.15■■■■□ 3.22
SNAPC4Q5SXM2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
SNAPC4Q5SXM2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
SNAPC4Q5SXM2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC35.15■■■■□ 3.22
SNAPC4Q5SXM2 NME6-213ENST00000451657 871 ntTSL 2 BASIC35.15■■■■□ 3.22
SNAPC4Q5SXM2 HLA-B-256ENST00000639848 1089 ntBASIC35.15■■■■□ 3.22
SNAPC4Q5SXM2 KRT16P2-201ENST00000414673 1423 ntBASIC35.14■■■■□ 3.22
SNAPC4Q5SXM2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
SNAPC4Q5SXM2 LSM12P1-201ENST00000411836 588 ntBASIC35.14■■■■□ 3.22
SNAPC4Q5SXM2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC35.14■■■■□ 3.22
SNAPC4Q5SXM2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC35.14■■■■□ 3.22
SNAPC4Q5SXM2 BX088651.1-201ENST00000540551 451 ntBASIC35.14■■■■□ 3.22
SNAPC4Q5SXM2 AC120498.10-201ENST00000621827 505 ntBASIC35.14■■■■□ 3.22
SNAPC4Q5SXM2 LINC01960-201ENST00000563759 1884 ntBASIC35.13■■■■□ 3.21
SNAPC4Q5SXM2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
SNAPC4Q5SXM2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC35.13■■■■□ 3.21
SNAPC4Q5SXM2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC35.13■■■■□ 3.21
SNAPC4Q5SXM2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC35.13■■■■□ 3.21
SNAPC4Q5SXM2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC35.13■■■■□ 3.21
SNAPC4Q5SXM2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC35.13■■■■□ 3.21
SNAPC4Q5SXM2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC35.13■■■■□ 3.21
SNAPC4Q5SXM2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
SNAPC4Q5SXM2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC35.12■■■■□ 3.21
SNAPC4Q5SXM2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC35.12■■■■□ 3.21
SNAPC4Q5SXM2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC35.12■■■■□ 3.21
SNAPC4Q5SXM2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC35.12■■■■□ 3.21
SNAPC4Q5SXM2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC35.12■■■■□ 3.21
SNAPC4Q5SXM2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC35.12■■■■□ 3.21
SNAPC4Q5SXM2 AC069544.1-201ENST00000609399 999 ntBASIC35.12■■■■□ 3.21
SNAPC4Q5SXM2 AC008175.2-201ENST00000612840 297 ntBASIC35.12■■■■□ 3.21
SNAPC4Q5SXM2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
SNAPC4Q5SXM2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
SNAPC4Q5SXM2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
SNAPC4Q5SXM2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC35.11■■■■□ 3.21
SNAPC4Q5SXM2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
SNAPC4Q5SXM2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC35.11■■■■□ 3.21
SNAPC4Q5SXM2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC35.11■■■■□ 3.21
SNAPC4Q5SXM2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
SNAPC4Q5SXM2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
SNAPC4Q5SXM2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
SNAPC4Q5SXM2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC35.11■■■■□ 3.21
SNAPC4Q5SXM2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC35.11■■■■□ 3.21
SNAPC4Q5SXM2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC35.11■■■■□ 3.21
SNAPC4Q5SXM2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
SNAPC4Q5SXM2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC35.1■■■■□ 3.21
SNAPC4Q5SXM2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC35.1■■■■□ 3.21
SNAPC4Q5SXM2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC35.1■■■■□ 3.21
SNAPC4Q5SXM2 AL355472.2-201ENST00000422958 438 ntBASIC35.1■■■■□ 3.21
SNAPC4Q5SXM2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
SNAPC4Q5SXM2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC35.1■■■■□ 3.21
SNAPC4Q5SXM2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC35.1■■■■□ 3.21
SNAPC4Q5SXM2 REXO1L12P-201ENST00000622156 912 ntBASIC35.1■■■■□ 3.21
SNAPC4Q5SXM2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC35.1■■■■□ 3.21
SNAPC4Q5SXM2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC35.1■■■■□ 3.21
SNAPC4Q5SXM2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC35.1■■■■□ 3.21
SNAPC4Q5SXM2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC35.09■■■■□ 3.21
SNAPC4Q5SXM2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC35.09■■■■□ 3.21
SNAPC4Q5SXM2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
SNAPC4Q5SXM2 AC004812.2-201ENST00000611079 2094 ntBASIC35.09■■■■□ 3.21
SNAPC4Q5SXM2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms