Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNFT1Q5M7Z0 AC068338.2-201ENST00000563278 1430 ntBASIC19.17■□□□□ 0.66
RNFT1Q5M7Z0 AC003102.1-202ENST00000563394 1796 ntBASIC19.17■□□□□ 0.66
RNFT1Q5M7Z0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RNFT1Q5M7Z0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.17■□□□□ 0.66
RNFT1Q5M7Z0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.17■□□□□ 0.66
RNFT1Q5M7Z0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNFT1Q5M7Z0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNFT1Q5M7Z0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNFT1Q5M7Z0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNFT1Q5M7Z0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNFT1Q5M7Z0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNFT1Q5M7Z0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNFT1Q5M7Z0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 SLC29A4P1-201ENST00000398760 971 ntBASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNFT1Q5M7Z0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNFT1Q5M7Z0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNFT1Q5M7Z0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RNFT1Q5M7Z0 ABHD17AP1-201ENST00000358206 933 ntBASIC19.15■□□□□ 0.66
RNFT1Q5M7Z0 CYP2T1P-201ENST00000432607 1285 ntBASIC19.15■□□□□ 0.66
RNFT1Q5M7Z0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RNFT1Q5M7Z0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.15■□□□□ 0.66
RNFT1Q5M7Z0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RNFT1Q5M7Z0 AC008175.2-201ENST00000612840 297 ntBASIC19.15■□□□□ 0.66
RNFT1Q5M7Z0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.15■□□□□ 0.66
RNFT1Q5M7Z0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.15■□□□□ 0.66
RNFT1Q5M7Z0 AC092053.2-201ENST00000640557 1818 ntBASIC19.15■□□□□ 0.66
RNFT1Q5M7Z0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNFT1Q5M7Z0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNFT1Q5M7Z0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.15■□□□□ 0.66
RNFT1Q5M7Z0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
RNFT1Q5M7Z0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.14■□□□□ 0.66
RNFT1Q5M7Z0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RNFT1Q5M7Z0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNFT1Q5M7Z0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNFT1Q5M7Z0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.14■□□□□ 0.66
RNFT1Q5M7Z0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNFT1Q5M7Z0 AC026471.6-201ENST00000622954 1905 ntBASIC19.14■□□□□ 0.65
RNFT1Q5M7Z0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNFT1Q5M7Z0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNFT1Q5M7Z0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.14■□□□□ 0.65
RNFT1Q5M7Z0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.14■□□□□ 0.65
RNFT1Q5M7Z0 AC098934.4-201ENST00000564127 592 ntBASIC19.14■□□□□ 0.65
RNFT1Q5M7Z0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.14■□□□□ 0.65
RNFT1Q5M7Z0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.14■□□□□ 0.65
RNFT1Q5M7Z0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.14■□□□□ 0.65
RNFT1Q5M7Z0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNFT1Q5M7Z0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
RNFT1Q5M7Z0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNFT1Q5M7Z0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.14■□□□□ 0.65
RNFT1Q5M7Z0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 POU5F1P4-201ENST00000413175 1085 ntBASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 AC007322.4-201ENST00000509611 723 ntBASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 AC061975.6-201ENST00000579045 1553 ntBASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNFT1Q5M7Z0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 CD99P1-205ENST00000527459 561 ntBASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNFT1Q5M7Z0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms