Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 CUP9YPL177C 921 nt3.56□□□□□ -1.84
VPS38Q05919 SEC6YIL068C 2418 nt3.56□□□□□ -1.84
VPS38Q05919 ALG8YOR067C 1734 nt3.56□□□□□ -1.84
VPS38Q05919 MSR1YHR091C 1932 nt3.55□□□□□ -1.84
VPS38Q05919 TGL3YMR313C 1929 nt3.55□□□□□ -1.84
VPS38Q05919 HTB1YDR224C 396 nt3.55□□□□□ -1.84
VPS38Q05919 CGR1YGL029W 363 nt3.55□□□□□ -1.84
VPS38Q05919 YHR097CYHR097C 1101 nt3.55□□□□□ -1.84
VPS38Q05919 BUR2YLR226W 1188 nt3.55□□□□□ -1.84
VPS38Q05919 END3YNL084C 1050 nt3.55□□□□□ -1.84
VPS38Q05919 HEF3YNL014W 3135 nt3.55□□□□□ -1.84
VPS38Q05919 SHQ1YIL104C 1524 nt3.54□□□□□ -1.84
VPS38Q05919 PIN4YBL051C 2007 nt3.54□□□□□ -1.84
VPS38Q05919 SAG1YJR004C 1953 nt3.54□□□□□ -1.84
VPS38Q05919 YTA7YGR270W 4140 nt3.54□□□□□ -1.84
VPS38Q05919 FRE4YNR060W 2160 nt3.54□□□□□ -1.84
VPS38Q05919 TGL2YDR058C 981 nt3.54□□□□□ -1.84
VPS38Q05919 RPC25YKL144C 639 nt3.54□□□□□ -1.84
VPS38Q05919 RPL17AYKL180W 555 nt3.54□□□□□ -1.84
VPS38Q05919 TEM1YML064C 738 nt3.54□□□□□ -1.84
VPS38Q05919 YMR087WYMR087W 855 nt3.54□□□□□ -1.84
VPS38Q05919 YBL068W-AYBL068W-A 237 nt3.54□□□□□ -1.84
VPS38Q05919 CMD1YBR109C 444 nt3.54□□□□□ -1.84
VPS38Q05919 ZDS2YML109W 2829 nt3.54□□□□□ -1.84
VPS38Q05919 EXO5YBR163W 1758 nt3.53□□□□□ -1.84
VPS38Q05919 CSR2YPR030W 3366 nt3.53□□□□□ -1.84
VPS38Q05919 GUK1YDR454C 564 nt3.53□□□□□ -1.84
VPS38Q05919 PET54YGR222W 882 nt3.53□□□□□ -1.84
VPS38Q05919 PXR1YGR280C 816 nt3.53□□□□□ -1.84
VPS38Q05919 YHR214C-EYHR214C-E 300 nt3.53□□□□□ -1.84
VPS38Q05919 COQ9YLR201C 783 nt3.53□□□□□ -1.84
VPS38Q05919 SMD2YLR275W 333 nt3.53□□□□□ -1.84
VPS38Q05919 YAR070CYAR070C 300 nt3.53□□□□□ -1.84
VPS38Q05919 IMP1YMR150C 573 nt3.53□□□□□ -1.84
VPS38Q05919 RLP7YNL002C 969 nt3.53□□□□□ -1.84
VPS38Q05919 MIC27YNL100W 705 nt3.53□□□□□ -1.84
VPS38Q05919 RHO5YNL180C 996 nt3.53□□□□□ -1.84
VPS38Q05919 HUA2YOR284W 732 nt3.53□□□□□ -1.84
VPS38Q05919 BAR1YIL015W 1764 nt3.53□□□□□ -1.84
VPS38Q05919 USE1YGL098W 738 nt3.52□□□□□ -1.85
VPS38Q05919 RGI2YIL057C 495 nt3.52□□□□□ -1.85
VPS38Q05919 ERP1YAR002C-A 660 nt3.52□□□□□ -1.85
VPS38Q05919 snR11snR11 258 nt3.52□□□□□ -1.85
VPS38Q05919 FDH2YPL275W 711 nt3.52□□□□□ -1.85
VPS38Q05919 CIN8YEL061C 3003 nt3.52□□□□□ -1.85
VPS38Q05919 DNM1YLL001W 2274 nt3.51□□□□□ -1.85
VPS38Q05919 DRS2YAL026C 4068 nt3.51□□□□□ -1.85
VPS38Q05919 PCI8YIL071C 1335 nt3.51□□□□□ -1.85
VPS38Q05919 YDR089WYDR089W 2610 nt3.51□□□□□ -1.85
VPS38Q05919 UTP5YDR398W 1932 nt3.51□□□□□ -1.85
VPS38Q05919 CWC23YGL128C 852 nt3.51□□□□□ -1.85
VPS38Q05919 SCM4YGR049W 564 nt3.51□□□□□ -1.85
VPS38Q05919 YBL029C-AYBL029C-A 285 nt3.51□□□□□ -1.85
VPS38Q05919 YGL176CYGL176C 1665 nt3.51□□□□□ -1.85
VPS38Q05919 LCB5YLR260W 2064 nt3.51□□□□□ -1.85
VPS38Q05919 YJR030CYJR030C 2238 nt3.51□□□□□ -1.85
VPS38Q05919 PWP2YCR057C 2772 nt3.51□□□□□ -1.85
VPS38Q05919 GSC2YGR032W 5688 nt3.5□□□□□ -1.85
VPS38Q05919 MET10YFR030W 3108 nt3.5□□□□□ -1.85
VPS38Q05919 YDL158CYDL158C 309 nt3.5□□□□□ -1.85
VPS38Q05919 FRQ1YDR373W 573 nt3.5□□□□□ -1.85
VPS38Q05919 ECO1YFR027W 846 nt3.5□□□□□ -1.85
VPS38Q05919 YHR182C-AYHR182C-A 474 nt3.5□□□□□ -1.85
VPS38Q05919 BET5YML077W 480 nt3.5□□□□□ -1.85
VPS38Q05919 GRX5YPL059W 453 nt3.5□□□□□ -1.85
VPS38Q05919 CPA2YJR109C 3357 nt3.5□□□□□ -1.85
VPS38Q05919 STP1YDR463W 1560 nt3.5□□□□□ -1.85
VPS38Q05919 MIG1YGL035C 1515 nt3.49□□□□□ -1.85
VPS38Q05919 VIP1YLR410W 3441 nt3.49□□□□□ -1.85
VPS38Q05919 YEL032C-AYEL032C-A 162 nt3.49□□□□□ -1.85
VPS38Q05919 SPT2YER161C 1002 nt3.49□□□□□ -1.85
VPS38Q05919 YFR010W-AYFR010W-A 189 nt3.49□□□□□ -1.85
VPS38Q05919 THP2YHR167W 786 nt3.49□□□□□ -1.85
VPS38Q05919 MRP8YKL142W 660 nt3.49□□□□□ -1.85
VPS38Q05919 MER1YNL210W 813 nt3.49□□□□□ -1.85
VPS38Q05919 CHK1YBR274W 1584 nt3.49□□□□□ -1.85
VPS38Q05919 HDA2YDR295C 2025 nt3.49□□□□□ -1.85
VPS38Q05919 VPS9YML097C 1356 nt3.49□□□□□ -1.85
VPS38Q05919 ENP2YGR145W 2124 nt3.49□□□□□ -1.85
VPS38Q05919 RAD4YER162C 2265 nt3.49□□□□□ -1.85
VPS38Q05919 EXO70YJL085W 1872 nt3.48□□□□□ -1.85
VPS38Q05919 TVP15YDR100W 432 nt3.48□□□□□ -1.85
VPS38Q05919 YDR149CYDR149C 708 nt3.48□□□□□ -1.85
VPS38Q05919 SPO11YHL022C 1197 nt3.48□□□□□ -1.85
VPS38Q05919 NNF1YJR112W 606 nt3.48□□□□□ -1.85
VPS38Q05919 MBR1YKL093W 1020 nt3.48□□□□□ -1.85
VPS38Q05919 RPS30AYLR287C-A 192 nt3.48□□□□□ -1.85
VPS38Q05919 YMR294W-AYMR294W-A 360 nt3.48□□□□□ -1.85
VPS38Q05919 YOR238WYOR238W 912 nt3.48□□□□□ -1.85
VPS38Q05919 YPL135C-AYPL135C-A 174 nt3.48□□□□□ -1.85
VPS38Q05919 ITT1YML068W 1395 nt3.48□□□□□ -1.85
VPS38Q05919 YMR317WYMR317W 3423 nt3.47□□□□□ -1.85
VPS38Q05919 CHS2YBR038W 2892 nt3.47□□□□□ -1.85
VPS38Q05919 RPL13AYDL082W 600 nt3.47□□□□□ -1.85
VPS38Q05919 YDR320W-BYDR320W-B 138 nt3.47□□□□□ -1.85
VPS38Q05919 MIG3YER028C 1185 nt3.47□□□□□ -1.85
VPS38Q05919 MIG2YGL209W 1149 nt3.47□□□□□ -1.85
VPS38Q05919 YGR126WYGR126W 693 nt3.47□□□□□ -1.85
VPS38Q05919 DOG2YHR043C 741 nt3.47□□□□□ -1.85
VPS38Q05919 ERG20YJL167W 1059 nt3.47□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 217.5 ms