Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCS1Q01581 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCS1Q01581 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.41■□□□□ 0.86
HMGCS1Q01581 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HMGCS1Q01581 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCS1Q01581 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGCS1Q01581 PBX2P1-201ENST00000493219 1291 ntBASIC20.41■□□□□ 0.86
HMGCS1Q01581 IGHV3-19-201ENST00000521488 291 ntBASIC20.41■□□□□ 0.86
HMGCS1Q01581 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCS1Q01581 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.41■□□□□ 0.86
HMGCS1Q01581 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HMGCS1Q01581 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCS1Q01581 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.41■□□□□ 0.86
HMGCS1Q01581 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HMGCS1Q01581 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCS1Q01581 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCS1Q01581 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCS1Q01581 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCS1Q01581 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCS1Q01581 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HMGCS1Q01581 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.41■□□□□ 0.86
HMGCS1Q01581 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCS1Q01581 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGCS1Q01581 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCS1Q01581 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCS1Q01581 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCS1Q01581 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCS1Q01581 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCS1Q01581 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCS1Q01581 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCS1Q01581 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.4■□□□□ 0.86
HMGCS1Q01581 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGCS1Q01581 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCS1Q01581 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGCS1Q01581 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCS1Q01581 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGCS1Q01581 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.4■□□□□ 0.86
HMGCS1Q01581 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGCS1Q01581 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCS1Q01581 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
HMGCS1Q01581 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCS1Q01581 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.4■□□□□ 0.86
HMGCS1Q01581 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HMGCS1Q01581 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HMGCS1Q01581 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HMGCS1Q01581 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HMGCS1Q01581 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HMGCS1Q01581 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HMGCS1Q01581 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HMGCS1Q01581 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCS1Q01581 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCS1Q01581 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.39■□□□□ 0.85
HMGCS1Q01581 AC099791.1-201ENST00000416440 715 ntBASIC20.39■□□□□ 0.85
HMGCS1Q01581 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCS1Q01581 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HMGCS1Q01581 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.39■□□□□ 0.85
HMGCS1Q01581 AL139246.5-201ENST00000606645 996 ntBASIC20.39■□□□□ 0.85
HMGCS1Q01581 AC110285.6-201ENST00000617652 491 ntBASIC20.39■□□□□ 0.85
HMGCS1Q01581 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCS1Q01581 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCS1Q01581 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HMGCS1Q01581 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCS1Q01581 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
HMGCS1Q01581 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCS1Q01581 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCS1Q01581 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCS1Q01581 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCS1Q01581 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCS1Q01581 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCS1Q01581 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.38■□□□□ 0.85
HMGCS1Q01581 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.38■□□□□ 0.85
HMGCS1Q01581 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCS1Q01581 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCS1Q01581 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGCS1Q01581 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HMGCS1Q01581 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCS1Q01581 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCS1Q01581 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.37■□□□□ 0.85
HMGCS1Q01581 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.37■□□□□ 0.85
HMGCS1Q01581 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.37■□□□□ 0.85
HMGCS1Q01581 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
HMGCS1Q01581 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
HMGCS1Q01581 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.37■□□□□ 0.85
HMGCS1Q01581 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HMGCS1Q01581 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGCS1Q01581 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
HMGCS1Q01581 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.37■□□□□ 0.85
HMGCS1Q01581 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCS1Q01581 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCS1Q01581 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCS1Q01581 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HMGCS1Q01581 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.36■□□□□ 0.85
HMGCS1Q01581 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.36■□□□□ 0.85
HMGCS1Q01581 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.36■□□□□ 0.85
HMGCS1Q01581 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.36■□□□□ 0.85
HMGCS1Q01581 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.36■□□□□ 0.85
HMGCS1Q01581 AC106739.1-201ENST00000617035 715 ntBASIC20.36■□□□□ 0.85
HMGCS1Q01581 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
HMGCS1Q01581 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
HMGCS1Q01581 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms