Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.77■□□□□ 0.76
RPS3AP61247 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RPS3AP61247 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RPS3AP61247 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.77■□□□□ 0.76
RPS3AP61247 AC068587.7-201ENST00000641602 218 ntBASIC19.77■□□□□ 0.76
RPS3AP61247 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPS3AP61247 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.77■□□□□ 0.76
RPS3AP61247 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.77■□□□□ 0.76
RPS3AP61247 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.77■□□□□ 0.75
RPS3AP61247 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RPS3AP61247 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RPS3AP61247 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.76■□□□□ 0.75
RPS3AP61247 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RPS3AP61247 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPS3AP61247 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS3AP61247 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.76■□□□□ 0.75
RPS3AP61247 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RPS3AP61247 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPS3AP61247 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPS3AP61247 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.76■□□□□ 0.75
RPS3AP61247 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.76■□□□□ 0.75
RPS3AP61247 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.76■□□□□ 0.75
RPS3AP61247 AP005435.1-201ENST00000529293 1178 ntBASIC19.76■□□□□ 0.75
RPS3AP61247 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.76■□□□□ 0.75
RPS3AP61247 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RPS3AP61247 AC010525.1-201ENST00000585559 441 ntBASIC19.76■□□□□ 0.75
RPS3AP61247 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.76■□□□□ 0.75
RPS3AP61247 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS3AP61247 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPS3AP61247 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
RPS3AP61247 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPS3AP61247 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
RPS3AP61247 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS3AP61247 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.75■□□□□ 0.75
RPS3AP61247 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RPS3AP61247 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RPS3AP61247 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS3AP61247 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS3AP61247 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
RPS3AP61247 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS3AP61247 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RPS3AP61247 ZNRF2P3-201ENST00000424200 374 ntBASIC19.74■□□□□ 0.75
RPS3AP61247 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.74■□□□□ 0.75
RPS3AP61247 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.74■□□□□ 0.75
RPS3AP61247 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.74■□□□□ 0.75
RPS3AP61247 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.74■□□□□ 0.75
RPS3AP61247 IGHV3-19-201ENST00000521488 291 ntBASIC19.74■□□□□ 0.75
RPS3AP61247 AC087239.1-201ENST00000622671 572 ntBASIC19.74■□□□□ 0.75
RPS3AP61247 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS3AP61247 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.74■□□□□ 0.75
RPS3AP61247 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS3AP61247 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RPS3AP61247 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.74■□□□□ 0.75
RPS3AP61247 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS3AP61247 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RPS3AP61247 TSPY26P-201ENST00000476365 1326 ntBASIC19.74■□□□□ 0.75
RPS3AP61247 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS3AP61247 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS3AP61247 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS3AP61247 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS3AP61247 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS3AP61247 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS3AP61247 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS3AP61247 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RPS3AP61247 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RPS3AP61247 IRS3P-201ENST00000223076 1006 ntBASIC19.73■□□□□ 0.75
RPS3AP61247 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPS3AP61247 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.73■□□□□ 0.75
RPS3AP61247 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.73■□□□□ 0.75
RPS3AP61247 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.73■□□□□ 0.75
RPS3AP61247 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.73■□□□□ 0.75
RPS3AP61247 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS3AP61247 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS3AP61247 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RPS3AP61247 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.72■□□□□ 0.75
RPS3AP61247 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RPS3AP61247 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS3AP61247 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RPS3AP61247 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPS3AP61247 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPS3AP61247 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS3AP61247 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPS3AP61247 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS3AP61247 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.72■□□□□ 0.75
RPS3AP61247 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPS3AP61247 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.72■□□□□ 0.75
RPS3AP61247 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.72■□□□□ 0.75
RPS3AP61247 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS3AP61247 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.72■□□□□ 0.75
RPS3AP61247 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS3AP61247 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS3AP61247 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS3AP61247 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS3AP61247 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS3AP61247 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS3AP61247 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS3AP61247 AC087742.1-201ENST00000575880 1738 ntBASIC19.71■□□□□ 0.75
RPS3AP61247 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RPS3AP61247 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS3AP61247 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms