Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.8■□□□□ 0.12
CMC4P56277 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.8■□□□□ 0.12
CMC4P56277 KRT18P20-201ENST00000548986 1279 ntBASIC15.8■□□□□ 0.12
CMC4P56277 DUX4L2-201ENST00000561772 1275 ntBASIC15.8■□□□□ 0.12
CMC4P56277 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
CMC4P56277 DUX4L6-201ENST00000626483 1275 ntBASIC15.8■□□□□ 0.12
CMC4P56277 DUX4L1-201ENST00000627662 1275 ntBASIC15.8■□□□□ 0.12
CMC4P56277 DUX4L8-201ENST00000629013 1275 ntBASIC15.8■□□□□ 0.12
CMC4P56277 DUX4L3-201ENST00000630187 1275 ntBASIC15.8■□□□□ 0.12
CMC4P56277 DUX4L7-201ENST00000630678 1275 ntBASIC15.8■□□□□ 0.12
CMC4P56277 DUX4L5-201ENST00000630834 1275 ntBASIC15.8■□□□□ 0.12
CMC4P56277 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CMC4P56277 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CMC4P56277 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMC4P56277 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CMC4P56277 FAM99A-202ENST00000538190 1989 ntBASIC15.79■□□□□ 0.12
CMC4P56277 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CMC4P56277 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMC4P56277 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.79■□□□□ 0.12
CMC4P56277 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.79■□□□□ 0.12
CMC4P56277 KRT18P11-201ENST00000435214 1283 ntBASIC15.79■□□□□ 0.12
CMC4P56277 EEF1DP3-203ENST00000566025 782 ntBASIC15.79■□□□□ 0.12
CMC4P56277 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMC4P56277 C11orf96-202ENST00000528572 1834 ntBASIC15.79■□□□□ 0.12
CMC4P56277 LTK-203ENST00000453182 2412 ntTSL 2 BASIC15.79■□□□□ 0.12
CMC4P56277 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.79■□□□□ 0.12
CMC4P56277 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CMC4P56277 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMC4P56277 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMC4P56277 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.79■□□□□ 0.12
CMC4P56277 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CMC4P56277 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMC4P56277 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CMC4P56277 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMC4P56277 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CMC4P56277 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.78■□□□□ 0.12
CMC4P56277 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMC4P56277 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMC4P56277 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.78■□□□□ 0.12
CMC4P56277 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CMC4P56277 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CMC4P56277 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CMC4P56277 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMC4P56277 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMC4P56277 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.78■□□□□ 0.12
CMC4P56277 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CMC4P56277 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CMC4P56277 RNF146-206ENST00000480444 843 ntTSL 2 BASIC15.78■□□□□ 0.12
CMC4P56277 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.78■□□□□ 0.12
CMC4P56277 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.78■□□□□ 0.12
CMC4P56277 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.78■□□□□ 0.12
CMC4P56277 AC138907.5-202ENST00000569484 235 ntBASIC15.78■□□□□ 0.12
CMC4P56277 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.78■□□□□ 0.12
CMC4P56277 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.78■□□□□ 0.12
CMC4P56277 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CMC4P56277 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
CMC4P56277 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CMC4P56277 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CMC4P56277 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CMC4P56277 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.77■□□□□ 0.12
CMC4P56277 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC15.77■□□□□ 0.12
CMC4P56277 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CMC4P56277 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.77■□□□□ 0.12
CMC4P56277 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.77■□□□□ 0.12
CMC4P56277 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CMC4P56277 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.77■□□□□ 0.12
CMC4P56277 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CMC4P56277 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.77■□□□□ 0.12
CMC4P56277 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CMC4P56277 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.12
CMC4P56277 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.77■□□□□ 0.12
CMC4P56277 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CMC4P56277 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CMC4P56277 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CMC4P56277 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
CMC4P56277 AP004607.4-201ENST00000530158 1459 ntBASIC15.77■□□□□ 0.11
CMC4P56277 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.77■□□□□ 0.11
CMC4P56277 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.77■□□□□ 0.11
CMC4P56277 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CMC4P56277 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CMC4P56277 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CMC4P56277 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CMC4P56277 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CMC4P56277 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.76■□□□□ 0.11
CMC4P56277 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CMC4P56277 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CMC4P56277 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CMC4P56277 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CMC4P56277 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CMC4P56277 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.76■□□□□ 0.11
CMC4P56277 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CMC4P56277 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.76■□□□□ 0.11
CMC4P56277 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CMC4P56277 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms