Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
POLR2JP52435 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR2JP52435 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
POLR2JP52435 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.26■□□□□ 0.83
POLR2JP52435 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR2JP52435 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
POLR2JP52435 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
POLR2JP52435 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
POLR2JP52435 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
POLR2JP52435 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.25■□□□□ 0.83
POLR2JP52435 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR2JP52435 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR2JP52435 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
POLR2JP52435 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
POLR2JP52435 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POLR2JP52435 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
POLR2JP52435 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR2JP52435 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
POLR2JP52435 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
POLR2JP52435 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POLR2JP52435 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.25■□□□□ 0.83
POLR2JP52435 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POLR2JP52435 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
POLR2JP52435 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POLR2JP52435 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.25■□□□□ 0.83
POLR2JP52435 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
POLR2JP52435 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.25■□□□□ 0.83
POLR2JP52435 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR2JP52435 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR2JP52435 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
POLR2JP52435 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR2JP52435 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR2JP52435 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.24■□□□□ 0.83
POLR2JP52435 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.24■□□□□ 0.83
POLR2JP52435 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.24■□□□□ 0.83
POLR2JP52435 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR2JP52435 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.24■□□□□ 0.83
POLR2JP52435 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR2JP52435 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
POLR2JP52435 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.24■□□□□ 0.83
POLR2JP52435 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.24■□□□□ 0.83
POLR2JP52435 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.23■□□□□ 0.83
POLR2JP52435 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.23■□□□□ 0.83
POLR2JP52435 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR2JP52435 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR2JP52435 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR2JP52435 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.23■□□□□ 0.83
POLR2JP52435 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.23■□□□□ 0.83
POLR2JP52435 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR2JP52435 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.23■□□□□ 0.83
POLR2JP52435 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.23■□□□□ 0.83
POLR2JP52435 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.23■□□□□ 0.83
POLR2JP52435 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR2JP52435 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR2JP52435 AL512631.2-201ENST00000604634 923 ntBASIC20.23■□□□□ 0.83
POLR2JP52435 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
POLR2JP52435 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLR2JP52435 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR2JP52435 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR2JP52435 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR2JP52435 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLR2JP52435 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR2JP52435 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR2JP52435 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.22■□□□□ 0.83
POLR2JP52435 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.22■□□□□ 0.83
POLR2JP52435 AL035685.1-201ENST00000636663 812 ntBASIC20.22■□□□□ 0.83
POLR2JP52435 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR2JP52435 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.22■□□□□ 0.83
POLR2JP52435 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR2JP52435 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLR2JP52435 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.22■□□□□ 0.83
POLR2JP52435 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.22■□□□□ 0.83
POLR2JP52435 LINC01006-201ENST00000333319 2292 ntBASIC20.22■□□□□ 0.83
POLR2JP52435 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
POLR2JP52435 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLR2JP52435 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
POLR2JP52435 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.21■□□□□ 0.83
POLR2JP52435 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLR2JP52435 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR2JP52435 GUSBP5-201ENST00000418136 578 ntBASIC20.21■□□□□ 0.83
POLR2JP52435 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR2JP52435 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLR2JP52435 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
POLR2JP52435 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLR2JP52435 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
POLR2JP52435 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR2JP52435 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR2JP52435 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.2■□□□□ 0.82
POLR2JP52435 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
POLR2JP52435 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR2JP52435 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.2■□□□□ 0.82
POLR2JP52435 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
POLR2JP52435 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.2■□□□□ 0.82
POLR2JP52435 AP005435.1-201ENST00000529293 1178 ntBASIC20.2■□□□□ 0.82
POLR2JP52435 AL138724.1-201ENST00000606771 1088 ntBASIC20.2■□□□□ 0.82
POLR2JP52435 FEM1AP1-201ENST00000431297 1995 ntBASIC20.2■□□□□ 0.82
POLR2JP52435 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR2JP52435 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLR2JP52435 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
POLR2JP52435 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms