Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCR9P51686 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCR9P51686 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCR9P51686 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCR9P51686 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCR9P51686 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCR9P51686 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.62■□□□□ 0.57
CCR9P51686 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCR9P51686 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.62■□□□□ 0.57
CCR9P51686 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.62■□□□□ 0.57
CCR9P51686 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CCR9P51686 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.62■□□□□ 0.57
CCR9P51686 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCR9P51686 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.62■□□□□ 0.57
CCR9P51686 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.62■□□□□ 0.57
CCR9P51686 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCR9P51686 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.62■□□□□ 0.57
CCR9P51686 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.62■□□□□ 0.57
CCR9P51686 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCR9P51686 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCR9P51686 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCR9P51686 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.61■□□□□ 0.57
CCR9P51686 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCR9P51686 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCR9P51686 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCR9P51686 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.61■□□□□ 0.57
CCR9P51686 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CCR9P51686 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCR9P51686 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.61■□□□□ 0.57
CCR9P51686 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCR9P51686 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCR9P51686 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCR9P51686 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCR9P51686 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCR9P51686 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCR9P51686 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCR9P51686 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCR9P51686 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCR9P51686 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCR9P51686 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCR9P51686 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCR9P51686 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCR9P51686 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.6■□□□□ 0.57
CCR9P51686 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCR9P51686 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.6■□□□□ 0.57
CCR9P51686 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.6■□□□□ 0.57
CCR9P51686 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.6■□□□□ 0.57
CCR9P51686 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCR9P51686 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.6■□□□□ 0.57
CCR9P51686 AC010525.1-201ENST00000585559 441 ntBASIC18.6■□□□□ 0.57
CCR9P51686 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.6■□□□□ 0.57
CCR9P51686 AL138724.1-201ENST00000606771 1088 ntBASIC18.6■□□□□ 0.57
CCR9P51686 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.6■□□□□ 0.57
CCR9P51686 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCR9P51686 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCR9P51686 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCR9P51686 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CCR9P51686 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCR9P51686 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCR9P51686 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.59■□□□□ 0.57
CCR9P51686 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCR9P51686 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCR9P51686 AL049796.1-201ENST00000565336 1766 ntBASIC18.59■□□□□ 0.57
CCR9P51686 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
CCR9P51686 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
CCR9P51686 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCR9P51686 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCR9P51686 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCR9P51686 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCR9P51686 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCR9P51686 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCR9P51686 AC003102.1-202ENST00000563394 1796 ntBASIC18.58■□□□□ 0.57
CCR9P51686 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCR9P51686 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCR9P51686 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCR9P51686 AP004607.7-201ENST00000527152 1677 ntBASIC18.58■□□□□ 0.57
CCR9P51686 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CCR9P51686 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCR9P51686 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.58■□□□□ 0.56
CCR9P51686 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.58■□□□□ 0.56
CCR9P51686 AP005435.1-201ENST00000529293 1178 ntBASIC18.58■□□□□ 0.56
CCR9P51686 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCR9P51686 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCR9P51686 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CCR9P51686 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms