Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDK7P50613 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDK7P50613 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDK7P50613 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDK7P50613 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CDK7P50613 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.56■■□□□ 1.36
CDK7P50613 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.56■■□□□ 1.36
CDK7P50613 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.56■■□□□ 1.36
CDK7P50613 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.56■■□□□ 1.36
CDK7P50613 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.56■■□□□ 1.36
CDK7P50613 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.56■■□□□ 1.36
CDK7P50613 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.56■■□□□ 1.36
CDK7P50613 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.56■■□□□ 1.36
CDK7P50613 AL162412.1-201ENST00000567129 965 ntBASIC23.56■■□□□ 1.36
CDK7P50613 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDK7P50613 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CDK7P50613 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDK7P50613 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDK7P50613 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.56■■□□□ 1.36
CDK7P50613 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.56■■□□□ 1.36
CDK7P50613 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDK7P50613 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDK7P50613 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.56■■□□□ 1.36
CDK7P50613 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDK7P50613 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.55■■□□□ 1.36
CDK7P50613 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.55■■□□□ 1.36
CDK7P50613 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.55■■□□□ 1.36
CDK7P50613 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.55■■□□□ 1.36
CDK7P50613 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.55■■□□□ 1.36
CDK7P50613 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.55■■□□□ 1.36
CDK7P50613 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CDK7P50613 AC010980.2-201ENST00000587099 1412 ntBASIC23.55■■□□□ 1.36
CDK7P50613 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.54■■□□□ 1.36
CDK7P50613 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDK7P50613 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CDK7P50613 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDK7P50613 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CDK7P50613 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDK7P50613 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDK7P50613 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
CDK7P50613 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CDK7P50613 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDK7P50613 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDK7P50613 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.54■■□□□ 1.36
CDK7P50613 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CDK7P50613 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDK7P50613 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDK7P50613 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.53■■□□□ 1.36
CDK7P50613 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
CDK7P50613 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDK7P50613 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDK7P50613 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDK7P50613 AC128676.1-201ENST00000454392 318 ntBASIC23.53■■□□□ 1.36
CDK7P50613 AC006058.3-201ENST00000606217 1069 ntBASIC23.53■■□□□ 1.36
CDK7P50613 AC008175.2-201ENST00000612840 297 ntBASIC23.53■■□□□ 1.36
CDK7P50613 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDK7P50613 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDK7P50613 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.53■■□□□ 1.36
CDK7P50613 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.52■■□□□ 1.36
CDK7P50613 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
CDK7P50613 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDK7P50613 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.52■■□□□ 1.36
CDK7P50613 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDK7P50613 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDK7P50613 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDK7P50613 AL596275.1-201ENST00000423464 877 ntBASIC23.52■■□□□ 1.36
CDK7P50613 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CDK7P50613 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.52■■□□□ 1.36
CDK7P50613 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.52■■□□□ 1.36
CDK7P50613 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
CDK7P50613 AC142381.4-202ENST00000563973 229 ntBASIC23.52■■□□□ 1.36
CDK7P50613 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.52■■□□□ 1.36
CDK7P50613 AL591742.1-201ENST00000604433 565 ntBASIC23.52■■□□□ 1.36
CDK7P50613 AC120498.10-201ENST00000621827 505 ntBASIC23.52■■□□□ 1.36
CDK7P50613 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDK7P50613 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
CDK7P50613 RBM17P2-201ENST00000616397 1405 ntBASIC23.51■■□□□ 1.35
CDK7P50613 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.51■■□□□ 1.35
CDK7P50613 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDK7P50613 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.51■■□□□ 1.35
CDK7P50613 POU5F1P4-201ENST00000413175 1085 ntBASIC23.51■■□□□ 1.35
CDK7P50613 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDK7P50613 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDK7P50613 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDK7P50613 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CDK7P50613 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDK7P50613 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
CDK7P50613 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDK7P50613 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.5■■□□□ 1.35
CDK7P50613 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDK7P50613 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDK7P50613 AC133561.1-201ENST00000568600 2415 ntBASIC23.5■■□□□ 1.35
CDK7P50613 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDK7P50613 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.5■■□□□ 1.35
CDK7P50613 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.5■■□□□ 1.35
CDK7P50613 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CDK7P50613 AL158047.1-201ENST00000445918 881 ntBASIC23.5■■□□□ 1.35
CDK7P50613 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.5■■□□□ 1.35
CDK7P50613 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.5■■□□□ 1.35
CDK7P50613 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms