Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLK3P49761 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.02■□□□□ 0.79
CLK3P49761 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLK3P49761 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLK3P49761 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLK3P49761 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CLK3P49761 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CLK3P49761 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.01■□□□□ 0.79
CLK3P49761 MIR939-201ENST00000401314 82 ntBASIC20.01■□□□□ 0.79
CLK3P49761 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CLK3P49761 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CLK3P49761 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.01■□□□□ 0.79
CLK3P49761 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLK3P49761 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLK3P49761 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLK3P49761 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CLK3P49761 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLK3P49761 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLK3P49761 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLK3P49761 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLK3P49761 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLK3P49761 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLK3P49761 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CLK3P49761 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CLK3P49761 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CLK3P49761 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLK3P49761 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CLK3P49761 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CLK3P49761 MIR638-201ENST00000385237 100 ntBASIC20■□□□□ 0.79
CLK3P49761 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLK3P49761 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLK3P49761 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLK3P49761 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CLK3P49761 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20■□□□□ 0.79
CLK3P49761 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK3P49761 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.99■□□□□ 0.79
CLK3P49761 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLK3P49761 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.99■□□□□ 0.79
CLK3P49761 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.99■□□□□ 0.79
CLK3P49761 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK3P49761 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK3P49761 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK3P49761 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK3P49761 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK3P49761 SUDS3P1-201ENST00000505831 966 ntBASIC19.99■□□□□ 0.79
CLK3P49761 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLK3P49761 CA15P2-201ENST00000611168 834 ntBASIC19.99■□□□□ 0.79
CLK3P49761 AL136967.2-201ENST00000623968 743 ntBASIC19.99■□□□□ 0.79
CLK3P49761 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.99■□□□□ 0.79
CLK3P49761 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLK3P49761 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLK3P49761 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLK3P49761 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
CLK3P49761 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.99■□□□□ 0.79
CLK3P49761 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CLK3P49761 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CLK3P49761 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK3P49761 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK3P49761 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK3P49761 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.98■□□□□ 0.79
CLK3P49761 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.98■□□□□ 0.79
CLK3P49761 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLK3P49761 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.98■□□□□ 0.79
CLK3P49761 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.98■□□□□ 0.79
CLK3P49761 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK3P49761 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CLK3P49761 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK3P49761 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLK3P49761 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
CLK3P49761 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK3P49761 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK3P49761 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK3P49761 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLK3P49761 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK3P49761 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CLK3P49761 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK3P49761 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CLK3P49761 IGHV3-19-201ENST00000521488 291 ntBASIC19.97■□□□□ 0.79
CLK3P49761 AL031432.3-201ENST00000607698 485 ntBASIC19.97■□□□□ 0.79
CLK3P49761 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLK3P49761 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK3P49761 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLK3P49761 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.97■□□□□ 0.79
CLK3P49761 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.97■□□□□ 0.79
CLK3P49761 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK3P49761 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK3P49761 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK3P49761 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CLK3P49761 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK3P49761 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLK3P49761 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.97■□□□□ 0.79
CLK3P49761 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.96■□□□□ 0.79
CLK3P49761 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
CLK3P49761 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.96■□□□□ 0.79
CLK3P49761 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK3P49761 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK3P49761 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLK3P49761 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLK3P49761 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLK3P49761 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms