Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.36■■□□□ 1.01
CSNK1DP48730 AC008175.2-201ENST00000612840 297 ntBASIC21.36■■□□□ 1.01
CSNK1DP48730 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.36■■□□□ 1.01
CSNK1DP48730 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1DP48730 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1DP48730 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.36■■□□□ 1.01
CSNK1DP48730 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1DP48730 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.36■■□□□ 1.01
CSNK1DP48730 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1DP48730 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CSNK1DP48730 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1DP48730 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1DP48730 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.35■■□□□ 1.01
CSNK1DP48730 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CSNK1DP48730 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CSNK1DP48730 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1DP48730 SLC7A5P1-201ENST00000568957 537 ntBASIC21.35■■□□□ 1.01
CSNK1DP48730 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1DP48730 AC092666.2-201ENST00000613287 246 ntBASIC21.35■■□□□ 1.01
CSNK1DP48730 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.35■■□□□ 1.01
CSNK1DP48730 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
CSNK1DP48730 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1DP48730 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CSNK1DP48730 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1DP48730 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1DP48730 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.34■■□□□ 1.01
CSNK1DP48730 AC092437.1-201ENST00000624794 1048 ntBASIC21.34■■□□□ 1.01
CSNK1DP48730 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1DP48730 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CSNK1DP48730 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1DP48730 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1DP48730 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1DP48730 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1DP48730 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1DP48730 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1DP48730 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1DP48730 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSNK1DP48730 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CSNK1DP48730 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSNK1DP48730 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CSNK1DP48730 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CSNK1DP48730 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CSNK1DP48730 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CSNK1DP48730 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSNK1DP48730 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.33■■□□□ 1.01
CSNK1DP48730 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.33■■□□□ 1.01
CSNK1DP48730 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.33■■□□□ 1
CSNK1DP48730 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.33■■□□□ 1
CSNK1DP48730 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.32■■□□□ 1
CSNK1DP48730 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.32■■□□□ 1
CSNK1DP48730 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.32■■□□□ 1
CSNK1DP48730 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.32■■□□□ 1
CSNK1DP48730 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
CSNK1DP48730 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSNK1DP48730 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CSNK1DP48730 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.32■■□□□ 1
CSNK1DP48730 AC016769.1-201ENST00000409132 1010 ntBASIC21.32■■□□□ 1
CSNK1DP48730 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CSNK1DP48730 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.32■■□□□ 1
CSNK1DP48730 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.32■■□□□ 1
CSNK1DP48730 IKBKGP1-201ENST00000612193 1073 ntBASIC21.32■■□□□ 1
CSNK1DP48730 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.32■■□□□ 1
CSNK1DP48730 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSNK1DP48730 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
CSNK1DP48730 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.32■■□□□ 1
CSNK1DP48730 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.32■■□□□ 1
CSNK1DP48730 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.32■■□□□ 1
CSNK1DP48730 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.32■■□□□ 1
CSNK1DP48730 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1DP48730 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.31■■□□□ 1
CSNK1DP48730 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1DP48730 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.31■■□□□ 1
CSNK1DP48730 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1DP48730 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1DP48730 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1DP48730 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1DP48730 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
CSNK1DP48730 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.31■■□□□ 1
CSNK1DP48730 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.31■■□□□ 1
CSNK1DP48730 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1DP48730 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CSNK1DP48730 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.31■■□□□ 1
CSNK1DP48730 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.31■■□□□ 1
CSNK1DP48730 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.31■■□□□ 1
CSNK1DP48730 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSNK1DP48730 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSNK1DP48730 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSNK1DP48730 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CSNK1DP48730 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.3■■□□□ 1
CSNK1DP48730 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSNK1DP48730 AC079834.2-201ENST00000609776 1949 ntBASIC21.3■■□□□ 1
CSNK1DP48730 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSNK1DP48730 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSNK1DP48730 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
CSNK1DP48730 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CSNK1DP48730 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSNK1DP48730 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CSNK1DP48730 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.3■■□□□ 1
CSNK1DP48730 AL137784.2-201ENST00000607332 1000 ntBASIC21.3■■□□□ 1
CSNK1DP48730 AC120498.10-201ENST00000621827 505 ntBASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms