Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 PPA2-216ENST00000509031 1177 ntTSL 1 (best)19.4■□□□□ 0.75e-7■■■■□ 24
MATR3P43243 PPA2-221ENST00000514209 481 ntTSL 518.74■□□□□ 0.595e-7■■■■□ 24
MATR3P43243 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.525e-7■■■■□ 24
MATR3P43243 PPA2-203ENST00000351450 1072 ntTSL 215.85■□□□□ 0.135e-7■■■■□ 24
MATR3P43243 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.11■□□□□ 0.015e-7■■■■□ 24
MATR3P43243 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.11■□□□□ 0.015e-7■■■■□ 24
MATR3P43243 PPA2-214ENST00000506815 839 ntTSL 29.5□□□□□ -0.895e-7■■■■□ 24
MATR3P43243 PPA2-211ENST00000503171 585 ntTSL 46.48□□□□□ -1.375e-7■■■■□ 24
MATR3P43243 PPA2-222ENST00000515567 368 ntTSL 54.88□□□□□ -1.635e-7■■■■□ 24
MATR3P43243 AL031666.3-201ENST00000609320 1006 ntBASIC4.68□□□□□ -1.664e-7■■■■□ 23.9
MATR3P43243 GALNT11-212ENST00000482812 580 ntTSL 425.43■■□□□ 1.662e-6■■■■□ 23.9
MATR3P43243 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.652e-6■■■■□ 23.9
MATR3P43243 GALNT11-210ENST00000447778 1231 ntTSL 518.96■□□□□ 0.632e-6■■■■□ 23.9
MATR3P43243 GALNT11-209ENST00000446096 521 ntTSL 318.86■□□□□ 0.612e-6■■■■□ 23.9
MATR3P43243 GALNT11-206ENST00000431668 626 ntTSL 316.56■□□□□ 0.242e-6■■■■□ 23.9
MATR3P43243 GALNT11-204ENST00000423337 580 ntTSL 316.16■□□□□ 0.182e-6■■■■□ 23.9
MATR3P43243 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.64■■□□□ 1.72e-6■■■■□ 23.9
MATR3P43243 HIBADH-203ENST00000428288 1669 ntTSL 321.98■■□□□ 1.115e-7■■■■□ 23.9
MATR3P43243 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.995e-7■■■■□ 23.9
MATR3P43243 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.96■□□□□ 0.952e-6■■■■□ 23.9
MATR3P43243 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.39■□□□□ 0.862e-6■■■■□ 23.9
MATR3P43243 SLC25A17-211ENST00000443810 593 ntTSL 320.22■□□□□ 0.832e-6■■■■□ 23.9
MATR3P43243 SLC25A17-203ENST00000412879 561 ntTSL 419.76■□□□□ 0.752e-6■■■■□ 23.9
MATR3P43243 SLC25A17-214ENST00000458600 801 ntTSL 318.74■□□□□ 0.592e-6■■■■□ 23.9
MATR3P43243 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC18.07■□□□□ 0.482e-6■■■■□ 23.9
MATR3P43243 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.392e-6■■■■□ 23.9
MATR3P43243 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.382e-6■■■■□ 23.9
MATR3P43243 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.36■□□□□ 0.372e-6■■■■□ 23.9
MATR3P43243 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.18■□□□□ 0.342e-6■■■■□ 23.9
MATR3P43243 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.96■□□□□ 0.312e-6■■■■□ 23.9
MATR3P43243 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.54■□□□□ 0.242e-6■■■■□ 23.9
MATR3P43243 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.222e-6■■■■□ 23.9
MATR3P43243 KIAA1468-206ENST00000587725 3268 ntTSL 216.36■□□□□ 0.211e-6■■■■□ 23.9
MATR3P43243 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.142e-6■■■■□ 23.9
MATR3P43243 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.122e-6■■■■□ 23.9
MATR3P43243 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.74■□□□□ 0.112e-6■■■■□ 23.9
MATR3P43243 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC15.67■□□□□ 0.12e-6■■■■□ 23.9
MATR3P43243 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.082e-6■■■■□ 23.9
MATR3P43243 HIBADH-202ENST00000425715 618 ntTSL 215.37■□□□□ 0.056e-8■■■■□ 23.9
MATR3P43243 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC15.3■□□□□ 0.041e-6■■■■□ 23.9
MATR3P43243 DEK-204ENST00000505224 1372 ntTSL 215.17■□□□□ 0.022e-6■■■■□ 23.9
MATR3P43243 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC14.97□□□□□ -0.012e-6■■■■□ 23.9
MATR3P43243 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC14.62□□□□□ -0.072e-6■■■■□ 23.9
MATR3P43243 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.083e-6■■■■□ 23.9
MATR3P43243 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC14.53□□□□□ -0.082e-6■■■■□ 23.9
MATR3P43243 SLC25A17-208ENST00000434185 565 ntTSL 414.34□□□□□ -0.112e-6■■■■□ 23.9
MATR3P43243 VAMP7-201ENST00000262640 2496 ntTSL 1 (best) BASIC14.16□□□□□ -0.143e-6■■■■□ 23.9
MATR3P43243 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.221e-6■■■■□ 23.9
MATR3P43243 PLEKHB2-208ENST00000439822 4177 ntTSL 3 BASIC13.25□□□□□ -0.292e-6■■■■□ 23.9
MATR3P43243 SLC25A17-206ENST00000427084 749 ntTSL 512.89□□□□□ -0.352e-6■■■■□ 23.9
MATR3P43243 VAMP7-206ENST00000488344 696 ntTSL 212.27□□□□□ -0.453e-6■■■■□ 23.9
MATR3P43243 VAMP7-203ENST00000460621 658 ntTSL 1 (best) BASIC11.87□□□□□ -0.513e-6■■■■□ 23.9
MATR3P43243 SLC25A17-210ENST00000435456 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.532e-6■■■■□ 23.9
MATR3P43243 PLEKHB2-201ENST00000234115 4208 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.592e-6■■■■□ 23.9
MATR3P43243 SLC25A17-213ENST00000449676 533 ntTSL 411.11□□□□□ -0.632e-6■■■■□ 23.9
MATR3P43243 SLC25A17-201ENST00000263255 2058 ntTSL 1 (best)10.24□□□□□ -0.772e-6■■■■□ 23.9
MATR3P43243 SLC25A17-216ENST00000491545 2530 ntTSL 1 (best)9.94□□□□□ -0.822e-6■■■■□ 23.9
MATR3P43243 SLC25A17-204ENST00000420970 1060 ntTSL 59.75□□□□□ -0.852e-6■■■■□ 23.9
MATR3P43243 SLC25A17-205ENST00000426396 641 ntTSL 59.75□□□□□ -0.852e-6■■■■□ 23.9
MATR3P43243 SLC25A17-209ENST00000434193 598 ntTSL 48.99□□□□□ -0.972e-6■■■■□ 23.9
MATR3P43243 SLC25A17-207ENST00000430221 734 ntTSL 48.49□□□□□ -1.052e-6■■■■□ 23.9
MATR3P43243 VAMP7-205ENST00000479687 742 ntTSL 57.51□□□□□ -1.213e-6■■■■□ 23.9
MATR3P43243 SLC25A17-212ENST00000447566 1243 ntTSL 57.36□□□□□ -1.232e-6■■■■□ 23.9
MATR3P43243 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.252e-6■■■■□ 23.9
MATR3P43243 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.292e-6■■■■□ 23.9
MATR3P43243 SUCO-207ENST00000608804 868 ntTSL 36.06□□□□□ -1.442e-6■■■■□ 23.9
MATR3P43243 VAMP7-204ENST00000463317 673 ntTSL 55.9□□□□□ -1.463e-6■■■■□ 23.9
MATR3P43243 DEK-205ENST00000507591 739 ntTSL 25.66□□□□□ -1.52e-6■■■■□ 23.9
MATR3P43243 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.33□□□□□ -1.562e-6■■■■□ 23.9
MATR3P43243 KIAA1468-210ENST00000591227 555 ntTSL 54.66□□□□□ -1.661e-6■■■■□ 23.9
MATR3P43243 VPS13B-207ENST00000518569 531 ntTSL 33.45□□□□□ -1.862e-6■■■■□ 23.9
MATR3P43243 MKLN1-208ENST00000494286 582 ntTSL 420.03■□□□□ 0.82e-6■■■■□ 23.9
MATR3P43243 MKLN1-205ENST00000446815 551 ntTSL 419.71■□□□□ 0.752e-6■■■■□ 23.9
MATR3P43243 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.67□□□□□ -0.062e-6■■■■□ 23.9
MATR3P43243 MKLN1-209ENST00000494785 2386 ntTSL 1 (best)12.16□□□□□ -0.462e-6■■■■□ 23.9
MATR3P43243 MKLN1-206ENST00000458153 2448 ntTSL 29.78□□□□□ -0.842e-6■■■■□ 23.9
MATR3P43243 MKLN1-202ENST00000416992 864 ntTSL 37.46□□□□□ -1.222e-6■■■■□ 23.9
MATR3P43243 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.45□□□□□ -1.542e-6■■■■□ 23.9
MATR3P43243 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.872e-6■■■■□ 23.9
MATR3P43243 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.12e-6■■■■□ 23.9
MATR3P43243 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.782e-6■■■■□ 23.9
MATR3P43243 CAPRIN2-213ENST00000542550 770 ntTSL 328.71■■■□□ 2.192e-12■■■■□ 23.9
MATR3P43243 CAPRIN2-211ENST00000540584 569 ntTSL 424.66■■□□□ 1.542e-12■■■■□ 23.9
MATR3P43243 CAPRIN2-212ENST00000541765 630 ntTSL 523.96■■□□□ 1.432e-12■■■■□ 23.9
MATR3P43243 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.94■■□□□ 1.422e-6■■■■□ 23.9
MATR3P43243 PHLDB1-204ENST00000524713 1591 ntTSL 523.7■■□□□ 1.382e-6■■■■□ 23.9
MATR3P43243 CAPRIN2-215ENST00000546129 501 ntTSL 422.77■■□□□ 1.242e-12■■■■□ 23.9
MATR3P43243 CAPRIN2-210ENST00000540436 557 ntTSL 322.42■■□□□ 1.182e-12■■■■□ 23.9
MATR3P43243 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.3■■□□□ 1.163e-6■■■■□ 23.9
MATR3P43243 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.152e-6■■■■□ 23.9
MATR3P43243 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.092e-6■■■■□ 23.9
MATR3P43243 WAC-AS1-201ENST00000527986 2323 ntTSL 1 (best)21.77■■□□□ 1.072e-6■■■■□ 23.9
MATR3P43243 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.48■■□□□ 1.032e-6■■■■□ 23.9
MATR3P43243 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 12e-6■■■■□ 23.9
MATR3P43243 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.892e-6■■■■□ 23.9
MATR3P43243 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.83e-6■■■■□ 23.9
MATR3P43243 CEP44-210ENST00000515299 913 ntTSL 519.85■□□□□ 0.772e-6■■■■□ 23.9
MATR3P43243 MTMR10-203ENST00000564787 631 ntTSL 519.78■□□□□ 0.762e-6■■■■□ 23.9
MATR3P43243 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.63■□□□□ 0.732e-6■■■■□ 23.9
MATR3P43243 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.682e-6■■■■□ 23.9
Retrieved 100 of 16,209 protein–RNA pairs in 95.1 ms