Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDKN1AP38936 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.08■□□□□ 0.49
CDKN1AP38936 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.08■□□□□ 0.49
CDKN1AP38936 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.08■□□□□ 0.49
CDKN1AP38936 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.08■□□□□ 0.49
CDKN1AP38936 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDKN1AP38936 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.08■□□□□ 0.48
CDKN1AP38936 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDKN1AP38936 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.08■□□□□ 0.48
CDKN1AP38936 EEF1DP3-203ENST00000566025 782 ntBASIC18.08■□□□□ 0.48
CDKN1AP38936 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.08■□□□□ 0.48
CDKN1AP38936 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDKN1AP38936 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDKN1AP38936 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN1AP38936 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN1AP38936 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.07■□□□□ 0.48
CDKN1AP38936 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.07■□□□□ 0.48
CDKN1AP38936 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKN1AP38936 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CDKN1AP38936 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKN1AP38936 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKN1AP38936 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN1AP38936 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDKN1AP38936 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN1AP38936 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN1AP38936 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDKN1AP38936 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN1AP38936 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CDKN1AP38936 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN1AP38936 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1AP38936 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1AP38936 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN1AP38936 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN1AP38936 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1AP38936 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1AP38936 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1AP38936 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1AP38936 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN1AP38936 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1AP38936 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN1AP38936 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.06■□□□□ 0.48
CDKN1AP38936 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CDKN1AP38936 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1AP38936 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.06■□□□□ 0.48
CDKN1AP38936 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.06■□□□□ 0.48
CDKN1AP38936 AC013268.1-206ENST00000638368 961 ntBASIC18.06■□□□□ 0.48
CDKN1AP38936 AC112229.1-201ENST00000639295 961 ntBASIC18.06■□□□□ 0.48
CDKN1AP38936 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDKN1AP38936 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1AP38936 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1AP38936 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1AP38936 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1AP38936 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN1AP38936 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN1AP38936 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKN1AP38936 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1AP38936 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1AP38936 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.05■□□□□ 0.48
CDKN1AP38936 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1AP38936 AC069152.1-201ENST00000438030 544 ntBASIC18.05■□□□□ 0.48
CDKN1AP38936 TERF1P5-201ENST00000477545 1207 ntBASIC18.05■□□□□ 0.48
CDKN1AP38936 AC098934.4-201ENST00000564127 592 ntBASIC18.05■□□□□ 0.48
CDKN1AP38936 AC053503.5-201ENST00000601508 636 ntBASIC18.05■□□□□ 0.48
CDKN1AP38936 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1AP38936 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDKN1AP38936 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CDKN1AP38936 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKN1AP38936 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1AP38936 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1AP38936 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CDKN1AP38936 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1AP38936 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1AP38936 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CDKN1AP38936 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN1AP38936 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1AP38936 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1AP38936 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1AP38936 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN1AP38936 AC137767.1-201ENST00000602918 1920 ntBASIC18.04■□□□□ 0.48
CDKN1AP38936 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1AP38936 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1AP38936 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.04■□□□□ 0.48
CDKN1AP38936 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1AP38936 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1AP38936 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.04■□□□□ 0.48
CDKN1AP38936 AC133552.2-202ENST00000575694 574 ntBASIC18.04■□□□□ 0.48
CDKN1AP38936 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKN1AP38936 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1AP38936 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKN1AP38936 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1AP38936 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1AP38936 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1AP38936 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKN1AP38936 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
CDKN1AP38936 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CDKN1AP38936 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CDKN1AP38936 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.03■□□□□ 0.48
CDKN1AP38936 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN1AP38936 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDKN1AP38936 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms