Protein–RNA interactions for Protein: P32842

VMA11, V-type proton ATPase subunit c', yeast

Predictions only

Length 164 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA11	P32842	FRE2	YKL220C	2136 nt		2.44	□□□□□ -2.02
VMA11	P32842	YOR296W	YOR296W	3870 nt		2.44	□□□□□ -2.02
VMA11	P32842	YDR250C	YDR250C	276 nt		2.44	□□□□□ -2.02
VMA11	P32842	DOG2	YHR043C	741 nt		2.44	□□□□□ -2.02
VMA11	P32842	EPT1	YHR123W	1176 nt		2.44	□□□□□ -2.02
VMA11	P32842	TRM112	YNR046W	408 nt		2.44	□□□□□ -2.02
VMA11	P32842	RPS10A	YOR293W	318 nt		2.44	□□□□□ -2.02
VMA11	P32842	MUM2	YBR057C	1101 nt		2.44	□□□□□ -2.02
VMA11	P32842	YPR074W-A	YPR074W-A	171 nt		2.44	□□□□□ -2.02
VMA11	P32842	YPR142C	YPR142C	564 nt		2.44	□□□□□ -2.02
VMA11	P32842	MRPL27	YBR282W	441 nt		2.44	□□□□□ -2.02
VMA11	P32842	SLH1	YGR271W	5904 nt		2.44	□□□□□ -2.02
VMA11	P32842	TLC1	TLC1	1301 nt		2.43	□□□□□ -2.02
VMA11	P32842	DBP10	YDL031W	2988 nt		2.43	□□□□□ -2.02
VMA11	P32842	YDL199C	YDL199C	2064 nt		2.43	□□□□□ -2.02
VMA11	P32842	RAX2	YLR084C	3663 nt		2.43	□□□□□ -2.02
VMA11	P32842	VAS1	YGR094W	3315 nt		2.43	□□□□□ -2.02
VMA11	P32842	RDI1	YDL135C	609 nt		2.43	□□□□□ -2.02
VMA11	P32842	YLR311C	YLR311C	348 nt		2.43	□□□□□ -2.02
VMA11	P32842	YML047W-A	YML047W-A	366 nt		2.43	□□□□□ -2.02
VMA11	P32842	YNL035C	YNL035C	1170 nt		2.43	□□□□□ -2.02
VMA11	P32842	YPR053C	YPR053C	456 nt		2.43	□□□□□ -2.02
VMA11	P32842	BNA4	YBL098W	1383 nt		2.43	□□□□□ -2.02
VMA11	P32842	MIP6	YHR015W	1980 nt		2.43	□□□□□ -2.02
VMA11	P32842	SNQ2	YDR011W	4506 nt		2.43	□□□□□ -2.02
VMA11	P32842	KRE2	YDR483W	1329 nt		2.42	□□□□□ -2.02
VMA11	P32842	DBP7	YKR024C	2229 nt		2.42	□□□□□ -2.02
VMA11	P32842	RSN1	YMR266W	2862 nt		2.42	□□□□□ -2.02
VMA11	P32842	YAT2	YER024W	2772 nt		2.42	□□□□□ -2.02
VMA11	P32842	RPN4	YDL020C	1596 nt		2.42	□□□□□ -2.02
VMA11	P32842	CGR1	YGL029W	363 nt		2.42	□□□□□ -2.02
VMA11	P32842	DOG1	YHR044C	741 nt		2.42	□□□□□ -2.02
VMA11	P32842	CFD1	YIL003W	882 nt		2.42	□□□□□ -2.02
VMA11	P32842	SNX4	YJL036W	1272 nt		2.42	□□□□□ -2.02
VMA11	P32842	EMC2	YJR088C	879 nt		2.42	□□□□□ -2.02
VMA11	P32842	RPC37	YKR025W	849 nt		2.42	□□□□□ -2.02
VMA11	P32842	SIC1	YLR079W	855 nt		2.42	□□□□□ -2.02
VMA11	P32842	YLR290C	YLR290C	834 nt		2.42	□□□□□ -2.02
VMA11	P32842	RDN58-1	RDN58-1	158 nt		2.42	□□□□□ -2.02
VMA11	P32842	RDN58-2	RDN58-2	158 nt		2.42	□□□□□ -2.02
VMA11	P32842	YPL035C	YPL035C	348 nt		2.42	□□□□□ -2.02
VMA11	P32842	CIN1	YOR349W	3045 nt		2.42	□□□□□ -2.02
VMA11	P32842	HUL5	YGL141W	2733 nt		2.41	□□□□□ -2.02
VMA11	P32842	EBS1	YDR206W	2655 nt		2.41	□□□□□ -2.02
VMA11	P32842	INP52	YNL106C	3552 nt		2.41	□□□□□ -2.02
VMA11	P32842	RMT2	YDR465C	1239 nt		2.41	□□□□□ -2.02
VMA11	P32842	SMT3	YDR510W	306 nt		2.41	□□□□□ -2.02
VMA11	P32842	KEG1	YFR042W	603 nt		2.41	□□□□□ -2.02
VMA11	P32842	YGR190C	YGR190C	366 nt		2.41	□□□□□ -2.02
VMA11	P32842	PPX1	YHR201C	1194 nt		2.41	□□□□□ -2.02
VMA11	P32842	DCG1	YIR030C	735 nt		2.41	□□□□□ -2.02
VMA11	P32842	OMA1	YKR087C	1038 nt		2.41	□□□□□ -2.02
VMA11	P32842	YMR075C-A	YMR075C-A	366 nt		2.41	□□□□□ -2.02
VMA11	P32842	YMR178W	YMR178W	825 nt		2.41	□□□□□ -2.02
VMA11	P32842	YMR294W-A	YMR294W-A	360 nt		2.41	□□□□□ -2.02
VMA11	P32842	IRC14	YOR135C	342 nt		2.41	□□□□□ -2.02
VMA11	P32842	MRP2	YPR166C	348 nt		2.41	□□□□□ -2.02
VMA11	P32842	HEH2	YDR458C	1992 nt		2.41	□□□□□ -2.02
VMA11	P32842	TFB2	YPL122C	1542 nt		2.41	□□□□□ -2.02
VMA11	P32842	NUF2	YOL069W	1356 nt		2.4	□□□□□ -2.02
VMA11	P32842	NHP10	YDL002C	612 nt		2.4	□□□□□ -2.03
VMA11	P32842	RPL35B	YDL136W	363 nt		2.4	□□□□□ -2.03
VMA11	P32842	YPR1	YDR368W	939 nt		2.4	□□□□□ -2.03
VMA11	P32842	YHR086W-A	YHR086W-A	162 nt		2.4	□□□□□ -2.03
VMA11	P32842	YIL024C	YIL024C	570 nt		2.4	□□□□□ -2.03
VMA11	P32842	CPR7	YJR032W	1182 nt		2.4	□□□□□ -2.03
VMA11	P32842	SSP2	YOR242C	1116 nt		2.4	□□□□□ -2.03
VMA11	P32842	TAF3	YPL011C	1062 nt		2.4	□□□□□ -2.03
VMA11	P32842	YPR203W	YPR203W	309 nt		2.4	□□□□□ -2.03
VMA11	P32842	PIN4	YBL051C	2007 nt		2.4	□□□□□ -2.03
VMA11	P32842	SPP382	YLR424W	2127 nt		2.39	□□□□□ -2.03
VMA11	P32842	FUN30	YAL019W	3396 nt		2.39	□□□□□ -2.03
VMA11	P32842	HRD1	YOL013C	1656 nt		2.39	□□□□□ -2.03
VMA11	P32842	GRX2	YDR513W	432 nt		2.39	□□□□□ -2.03
VMA11	P32842	YDR535C	YDR535C	501 nt		2.39	□□□□□ -2.03
VMA11	P32842	THO1	YER063W	657 nt		2.39	□□□□□ -2.03
VMA11	P32842	RSM26	YJR101W	801 nt		2.39	□□□□□ -2.03
VMA11	P32842	LAC1	YKL008C	1257 nt		2.39	□□□□□ -2.03
VMA11	P32842	VMA5	YKL080W	1179 nt		2.39	□□□□□ -2.03
VMA11	P32842	GLO1	YML004C	981 nt		2.39	□□□□□ -2.03
VMA11	P32842	PRE8	YML092C	753 nt		2.39	□□□□□ -2.03
VMA11	P32842	SEC65	YML105C	822 nt		2.39	□□□□□ -2.03
VMA11	P32842	EAF7	YNL136W	1278 nt		2.39	□□□□□ -2.03
VMA11	P32842	AAH1	YNL141W	1044 nt		2.39	□□□□□ -2.03
VMA11	P32842	RSM19	YNR037C	276 nt		2.39	□□□□□ -2.03
VMA11	P32842	YOR331C	YOR331C	558 nt		2.39	□□□□□ -2.03
VMA11	P32842	SPP381	YBR152W	876 nt		2.39	□□□□□ -2.03
VMA11	P32842	SEC27	YGL137W	2670 nt		2.39	□□□□□ -2.03
VMA11	P32842	MET5	YJR137C	4329 nt		2.39	□□□□□ -2.03
VMA11	P32842	VIP1	YLR410W	3441 nt		2.39	□□□□□ -2.03
VMA11	P32842	TSC13	YDL015C	933 nt		2.38	□□□□□ -2.03
VMA11	P32842	YHL005C	YHL005C	393 nt		2.38	□□□□□ -2.03
VMA11	P32842	PCL7	YIL050W	858 nt		2.38	□□□□□ -2.03
VMA11	P32842	POP8	YBL018C	402 nt		2.38	□□□□□ -2.03
VMA11	P32842	SMA2	YML066C	1110 nt		2.38	□□□□□ -2.03
VMA11	P32842	YML096W	YML096W	1578 nt		2.38	□□□□□ -2.03
VMA11	P32842	RUF20	RUF20	443 nt		2.38	□□□□□ -2.03
VMA11	P32842	RRP7	YCL031C	894 nt		2.38	□□□□□ -2.03
VMA11	P32842	TOR1	YJR066W	7413 nt		2.38	□□□□□ -2.03
VMA11	P32842	MDM1	YML104C	3384 nt		2.38	□□□□□ -2.03

Retrieved 100 of 7,029 protein–RNA pairs in 19.8 ms