Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1EP28566 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1EP28566 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1EP28566 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.24■□□□□ 0.83
HTR1EP28566 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HTR1EP28566 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1EP28566 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1EP28566 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.24■□□□□ 0.83
HTR1EP28566 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1EP28566 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.24■□□□□ 0.83
HTR1EP28566 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1EP28566 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.24■□□□□ 0.83
HTR1EP28566 AC090192.1-201ENST00000517740 490 ntBASIC20.24■□□□□ 0.83
HTR1EP28566 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.24■□□□□ 0.83
HTR1EP28566 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.24■□□□□ 0.83
HTR1EP28566 AC011298.3-201ENST00000615796 283 ntBASIC20.24■□□□□ 0.83
HTR1EP28566 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1EP28566 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1EP28566 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
HTR1EP28566 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.24■□□□□ 0.83
HTR1EP28566 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HTR1EP28566 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HTR1EP28566 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.23■□□□□ 0.83
HTR1EP28566 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HTR1EP28566 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HTR1EP28566 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
HTR1EP28566 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTR1EP28566 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTR1EP28566 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTR1EP28566 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTR1EP28566 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HTR1EP28566 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.23■□□□□ 0.83
HTR1EP28566 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.23■□□□□ 0.83
HTR1EP28566 AL138724.1-201ENST00000606771 1088 ntBASIC20.23■□□□□ 0.83
HTR1EP28566 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.23■□□□□ 0.83
HTR1EP28566 AL031602.1-201ENST00000633169 911 ntBASIC20.23■□□□□ 0.83
HTR1EP28566 RARRES2P11-201ENST00000635158 484 ntBASIC20.23■□□□□ 0.83
HTR1EP28566 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HTR1EP28566 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.23■□□□□ 0.83
HTR1EP28566 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HTR1EP28566 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.23■□□□□ 0.83
HTR1EP28566 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HTR1EP28566 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1EP28566 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1EP28566 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1EP28566 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1EP28566 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
HTR1EP28566 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1EP28566 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1EP28566 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.22■□□□□ 0.83
HTR1EP28566 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HTR1EP28566 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.22■□□□□ 0.83
HTR1EP28566 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.22■□□□□ 0.83
HTR1EP28566 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.22■□□□□ 0.83
HTR1EP28566 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.22■□□□□ 0.83
HTR1EP28566 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HTR1EP28566 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1EP28566 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1EP28566 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1EP28566 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1EP28566 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.22■□□□□ 0.83
HTR1EP28566 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
HTR1EP28566 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HTR1EP28566 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.22■□□□□ 0.83
HTR1EP28566 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1EP28566 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.21■□□□□ 0.83
HTR1EP28566 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.21■□□□□ 0.83
HTR1EP28566 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HTR1EP28566 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1EP28566 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.21■□□□□ 0.83
HTR1EP28566 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.21■□□□□ 0.83
HTR1EP28566 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.21■□□□□ 0.83
HTR1EP28566 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1EP28566 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1EP28566 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1EP28566 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1EP28566 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1EP28566 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HTR1EP28566 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1EP28566 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HTR1EP28566 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.21■□□□□ 0.83
HTR1EP28566 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
HTR1EP28566 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1EP28566 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1EP28566 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.2■□□□□ 0.82
HTR1EP28566 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1EP28566 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
HTR1EP28566 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
HTR1EP28566 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1EP28566 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.2■□□□□ 0.82
HTR1EP28566 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1EP28566 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1EP28566 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.2■□□□□ 0.82
HTR1EP28566 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.2■□□□□ 0.82
HTR1EP28566 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1EP28566 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1EP28566 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1EP28566 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1EP28566 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HTR1EP28566 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms