Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VARSP26640 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VARSP26640 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VARSP26640 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VARSP26640 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VARSP26640 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.76■□□□□ 0.91
VARSP26640 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VARSP26640 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
VARSP26640 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.76■□□□□ 0.91
VARSP26640 AC073130.3-201ENST00000624389 2278 ntBASIC20.76■□□□□ 0.91
VARSP26640 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.76■□□□□ 0.91
VARSP26640 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
VARSP26640 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
VARSP26640 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARSP26640 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARSP26640 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARSP26640 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARSP26640 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.75■□□□□ 0.91
VARSP26640 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.75■□□□□ 0.91
VARSP26640 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VARSP26640 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.75■□□□□ 0.91
VARSP26640 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARSP26640 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARSP26640 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VARSP26640 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.75■□□□□ 0.91
VARSP26640 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
VARSP26640 AC026471.6-201ENST00000622954 1905 ntBASIC20.74■□□□□ 0.91
VARSP26640 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARSP26640 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARSP26640 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARSP26640 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARSP26640 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARSP26640 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.74■□□□□ 0.91
VARSP26640 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VARSP26640 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARSP26640 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.74■□□□□ 0.91
VARSP26640 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.74■□□□□ 0.91
VARSP26640 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARSP26640 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.74■□□□□ 0.91
VARSP26640 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VARSP26640 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VARSP26640 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.74■□□□□ 0.91
VARSP26640 SMUG1P1-201ENST00000590640 811 ntBASIC20.74■□□□□ 0.91
VARSP26640 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.74■□□□□ 0.91
VARSP26640 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
VARSP26640 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARSP26640 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.74■□□□□ 0.91
VARSP26640 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VARSP26640 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
VARSP26640 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
VARSP26640 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.73■□□□□ 0.91
VARSP26640 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.73■□□□□ 0.91
VARSP26640 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VARSP26640 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.73■□□□□ 0.91
VARSP26640 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.73■□□□□ 0.91
VARSP26640 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VARSP26640 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VARSP26640 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VARSP26640 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
VARSP26640 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.73■□□□□ 0.91
VARSP26640 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.73■□□□□ 0.91
VARSP26640 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VARSP26640 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VARSP26640 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VARSP26640 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
VARSP26640 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VARSP26640 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.73■□□□□ 0.91
VARSP26640 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VARSP26640 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VARSP26640 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.72■□□□□ 0.91
VARSP26640 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VARSP26640 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VARSP26640 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VARSP26640 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VARSP26640 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VARSP26640 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VARSP26640 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VARSP26640 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VARSP26640 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.72■□□□□ 0.91
VARSP26640 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.72■□□□□ 0.91
VARSP26640 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.72■□□□□ 0.91
VARSP26640 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VARSP26640 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.72■□□□□ 0.91
VARSP26640 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
VARSP26640 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
VARSP26640 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.72■□□□□ 0.91
VARSP26640 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.72■□□□□ 0.91
VARSP26640 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.71■□□□□ 0.91
VARSP26640 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VARSP26640 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VARSP26640 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VARSP26640 AP004607.7-201ENST00000527152 1677 ntBASIC20.71■□□□□ 0.91
VARSP26640 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VARSP26640 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VARSP26640 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VARSP26640 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.71■□□□□ 0.91
VARSP26640 AL137784.2-201ENST00000607332 1000 ntBASIC20.71■□□□□ 0.91
VARSP26640 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.71■□□□□ 0.91
VARSP26640 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VARSP26640 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms