Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.68■□□□□ 0.267e-82■□□□□ 9.4
SFPQP23246 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.198e-8■□□□□ 9.4
SFPQP23246 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.01□□□□□ -1.618e-8■□□□□ 9.4
SFPQP23246 TFB1M-204ENST00000470239 433 ntTSL 315.26■□□□□ 0.031e-10■□□□□ 9.4
SFPQP23246 TFB1M-201ENST00000367166 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.541e-10■□□□□ 9.4
SFPQP23246 TFB1M-209ENST00000495806 444 ntTSL 37.6□□□□□ -1.191e-10■□□□□ 9.4
SFPQP23246 TFB1M-203ENST00000468889 621 ntTSL 34.82□□□□□ -1.641e-10■□□□□ 9.4
SFPQP23246 TFB1M-208ENST00000489874 563 ntTSL 33.21□□□□□ -1.91e-10■□□□□ 9.4
SFPQP23246 POR-214ENST00000449920 283 ntTSL 56.14□□□□□ -1.432e-7■□□□□ 9.4
SFPQP23246 MATR3-205ENST00000503340 696 ntTSL 39.67□□□□□ -0.865e-6■□□□□ 9.3
SFPQP23246 MATR3-224ENST00000514488 564 ntTSL 49.59□□□□□ -0.875e-6■□□□□ 9.3
SFPQP23246 MATR3-207ENST00000504023 770 ntTSL 48.84□□□□□ -0.995e-6■□□□□ 9.3
SFPQP23246 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC35.16■■■■□ 3.225e-6■□□□□ 9.3
SFPQP23246 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.18■■□□□ 1.945e-6■□□□□ 9.3
SFPQP23246 SPATS2-212ENST00000549298 643 ntTSL 326.6■■□□□ 1.855e-6■□□□□ 9.3
SFPQP23246 PHF14-214ENST00000521747 2479 ntTSL 226.13■■□□□ 1.775e-6■□□□□ 9.3
SFPQP23246 GNPTG-205ENST00000527168 1317 ntTSL 525.87■■□□□ 1.735e-6■□□□□ 9.3
SFPQP23246 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.725e-6■□□□□ 9.3
SFPQP23246 SPATS2-211ENST00000549179 570 ntTSL 425.49■■□□□ 1.675e-6■□□□□ 9.3
SFPQP23246 SPATS2-218ENST00000551540 720 ntTSL 525.49■■□□□ 1.675e-6■□□□□ 9.3
SFPQP23246 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.39■■□□□ 1.665e-6■□□□□ 9.3
SFPQP23246 PHF14-202ENST00000423760 2627 ntTSL 224.98■■□□□ 1.595e-6■□□□□ 9.3
SFPQP23246 GNPTG-208ENST00000529957 922 ntTSL 524.7■■□□□ 1.545e-6■□□□□ 9.3
SFPQP23246 GNPTG-209ENST00000534197 420 ntTSL 324.7■■□□□ 1.545e-6■□□□□ 9.3
SFPQP23246 SPATS2-209ENST00000548777 505 ntTSL 324.48■■□□□ 1.515e-6■□□□□ 9.3
SFPQP23246 GNPTG-207ENST00000529110 552 ntTSL 224.45■■□□□ 1.55e-6■□□□□ 9.3
SFPQP23246 GNPTG-206ENST00000527876 550 ntTSL 424.43■■□□□ 1.55e-6■□□□□ 9.3
SFPQP23246 CYHR1-207ENST00000528558 907 ntTSL 224.38■■□□□ 1.495e-6■□□□□ 9.3
SFPQP23246 SPATS2-214ENST00000549412 2781 ntTSL 224■■□□□ 1.435e-6■□□□□ 9.3
SFPQP23246 APLP2-208ENST00000526330 582 ntTSL 323.46■■□□□ 1.355e-6■□□□□ 9.3
SFPQP23246 APLP2-209ENST00000527702 579 ntTSL 423.46■■□□□ 1.355e-6■□□□□ 9.3
SFPQP23246 APLP2-213ENST00000529701 573 ntTSL 523.46■■□□□ 1.355e-6■□□□□ 9.3
SFPQP23246 APLP2-214ENST00000530132 542 ntTSL 423.46■■□□□ 1.355e-6■□□□□ 9.3
SFPQP23246 APLP2-217ENST00000533195 560 ntTSL 423.46■■□□□ 1.355e-6■□□□□ 9.3
SFPQP23246 APLP2-218ENST00000533532 584 ntTSL 223.46■■□□□ 1.355e-6■□□□□ 9.3
SFPQP23246 APLP2-220ENST00000533618 574 ntTSL 423.46■■□□□ 1.355e-6■□□□□ 9.3
SFPQP23246 APLP2-221ENST00000533713 560 ntTSL 423.46■■□□□ 1.355e-6■□□□□ 9.3
SFPQP23246 APLP2-223ENST00000534001 585 ntTSL 423.46■■□□□ 1.355e-6■□□□□ 9.3
SFPQP23246 APLP2-224ENST00000534582 556 ntTSL 523.46■■□□□ 1.355e-6■□□□□ 9.3
SFPQP23246 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.83■■□□□ 1.255e-6■□□□□ 9.3
SFPQP23246 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.41■■□□□ 1.185e-6■□□□□ 9.3
SFPQP23246 APLP2-216ENST00000532456 664 ntTSL 421.81■■□□□ 1.085e-6■□□□□ 9.3
SFPQP23246 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.58■■□□□ 1.055e-6■□□□□ 9.3
SFPQP23246 GNPTG-202ENST00000526820 572 ntTSL 321.54■■□□□ 1.045e-6■□□□□ 9.3
SFPQP23246 XXYLT1-206ENST00000455281 557 ntTSL 421.46■■□□□ 1.035e-6■□□□□ 9.3
SFPQP23246 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.31■■□□□ 15e-6■□□□□ 9.3
SFPQP23246 APLP2-219ENST00000533616 2041 ntTSL 221.01■□□□□ 0.955e-6■□□□□ 9.3
SFPQP23246 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.95e-6■□□□□ 9.3
SFPQP23246 SARDH-206ENST00000427237 1957 ntTSL 220.43■□□□□ 0.865e-6■□□□□ 9.3
SFPQP23246 XXYLT1-211ENST00000494175 565 ntTSL 420.38■□□□□ 0.855e-6■□□□□ 9.3
SFPQP23246 LPIN2-203ENST00000584294 936 ntTSL 320.29■□□□□ 0.845e-6■□□□□ 9.3
SFPQP23246 DVL1-203ENST00000472445 639 ntTSL 220.19■□□□□ 0.825e-6■□□□□ 9.3
SFPQP23246 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.765e-6■□□□□ 9.3
SFPQP23246 SPATS2-205ENST00000548388 564 ntTSL 219.42■□□□□ 0.75e-6■□□□□ 9.3
SFPQP23246 SPATS2-219ENST00000552171 465 ntTSL 519.42■□□□□ 0.75e-6■□□□□ 9.3
SFPQP23246 CYHR1-206ENST00000526887 1012 ntTSL 319.37■□□□□ 0.695e-6■□□□□ 9.3
SFPQP23246 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.655e-6■□□□□ 9.3
SFPQP23246 APLP2-225ENST00000534761 551 ntTSL 518.83■□□□□ 0.65e-6■□□□□ 9.3
SFPQP23246 MEMO1-205ENST00000413686 769 ntTSL 317.86■□□□□ 0.455e-6■□□□□ 9.3
SFPQP23246 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.45e-6■□□□□ 9.3
SFPQP23246 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.77■□□□□ 0.285e-6■□□□□ 9.3
SFPQP23246 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.77■□□□□ 0.275e-6■□□□□ 9.3
SFPQP23246 SPATS2-217ENST00000550997 675 ntTSL 516.65■□□□□ 0.265e-6■□□□□ 9.3
SFPQP23246 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.255e-6■□□□□ 9.3
SFPQP23246 SPATS2-216ENST00000550643 527 ntTSL 416.61■□□□□ 0.255e-6■□□□□ 9.3
SFPQP23246 APLP2-211ENST00000529235 537 ntTSL 416.43■□□□□ 0.225e-6■□□□□ 9.3
SFPQP23246 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.31■□□□□ 0.25e-6■□□□□ 9.3
SFPQP23246 MEMO1-209ENST00000490459 1242 ntTSL 216.01■□□□□ 0.155e-6■□□□□ 9.3
SFPQP23246 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.155e-6■□□□□ 9.3
SFPQP23246 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.085e-6■□□□□ 9.3
SFPQP23246 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.025e-6■□□□□ 9.3
SFPQP23246 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 05e-6■□□□□ 9.3
SFPQP23246 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.025e-6■□□□□ 9.3
SFPQP23246 SPATS2-213ENST00000549375 1061 ntTSL 214.79□□□□□ -0.045e-6■□□□□ 9.3
SFPQP23246 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.175e-6■□□□□ 9.3
SFPQP23246 SPATS2-207ENST00000548710 558 ntTSL 413.84□□□□□ -0.195e-6■□□□□ 9.3
SFPQP23246 MEMO1-201ENST00000295065 4505 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.195e-6■□□□□ 9.3
SFPQP23246 LPIN2-201ENST00000261596 6229 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.285e-6■□□□□ 9.3
SFPQP23246 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC13.13□□□□□ -0.315e-6■□□□□ 9.3
SFPQP23246 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.885e-6■□□□□ 9.3
SFPQP23246 SPATS2-204ENST00000548377 552 ntTSL 48.75□□□□□ -1.015e-6■□□□□ 9.3
SFPQP23246 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.015e-6■□□□□ 9.3
SFPQP23246 PHF14-208ENST00000481418 792 ntTSL 38.01□□□□□ -1.135e-6■□□□□ 9.3
SFPQP23246 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.335e-6■□□□□ 9.3
SFPQP23246 PHF14-204ENST00000470665 1005 ntTSL 24.87□□□□□ -1.635e-6■□□□□ 9.3
SFPQP23246 DLEU1-216ENST00000473075 348 ntTSL 54.65□□□□□ -1.675e-6■□□□□ 9.3
SFPQP23246 DLEU1-224ENST00000483444 332 ntTSL 1 (best)4.39□□□□□ -1.715e-6■□□□□ 9.3
SFPQP23246 DPY30-206ENST00000446765 1519 ntTSL 54.04□□□□□ -1.765e-6■□□□□ 9.3
SFPQP23246 SPATS2-206ENST00000548654 546 ntTSL 33.92□□□□□ -1.785e-6■□□□□ 9.3
SFPQP23246 SLC7A11-202ENST00000509248 797 ntTSL 53.87□□□□□ -1.795e-6■□□□□ 9.3
SFPQP23246 SPATS2-215ENST00000549538 570 ntTSL 43.55□□□□□ -1.845e-6■□□□□ 9.3
SFPQP23246 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC15.29■□□□□ 0.042e-14■□□□□ 9.3
SFPQP23246 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.52□□□□□ -1.211e-7■□□□□ 9.3
SFPQP23246 ZNF638-227ENST00000601581 574 ntTSL 55.94□□□□□ -1.461e-7■□□□□ 9.3
SFPQP23246 PTMA-206ENST00000412128 863 ntTSL 327.48■■□□□ 1.991e-7■□□□□ 9.2
SFPQP23246 PTMA-207ENST00000440384 222 ntTSL 321.29■■□□□ 11e-7■□□□□ 9.2
SFPQP23246 CDC14B-206ENST00000452280 804 ntTSL 320.4■□□□□ 0.861e-7■□□□□ 9.2
SFPQP23246 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.141e-7■□□□□ 9.2
SFPQP23246 PTMA-210ENST00000467816 378 ntTSL 214.86□□□□□ -0.031e-7■□□□□ 9.2
SFPQP23246 AIG1-204ENST00000367601 727 ntTSL 513.97□□□□□ -0.171e-7■□□□□ 9.2
Retrieved 100 of 4,991 protein–RNA pairs in 26.3 ms