Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CTLA4P16410 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
CTLA4P16410 AC105233.4-201ENST00000642045 216 ntBASIC18.83■□□□□ 0.6
CTLA4P16410 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTLA4P16410 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CTLA4P16410 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CTLA4P16410 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTLA4P16410 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTLA4P16410 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.82■□□□□ 0.6
CTLA4P16410 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
CTLA4P16410 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTLA4P16410 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTLA4P16410 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CTLA4P16410 AC091305.1-201ENST00000479476 895 ntBASIC18.82■□□□□ 0.6
CTLA4P16410 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.82■□□□□ 0.6
CTLA4P16410 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.82■□□□□ 0.6
CTLA4P16410 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
CTLA4P16410 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.82■□□□□ 0.6
CTLA4P16410 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CTLA4P16410 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CTLA4P16410 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.82■□□□□ 0.6
CTLA4P16410 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTLA4P16410 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
CTLA4P16410 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.81■□□□□ 0.6
CTLA4P16410 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTLA4P16410 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTLA4P16410 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTLA4P16410 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTLA4P16410 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CTLA4P16410 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTLA4P16410 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.81■□□□□ 0.6
CTLA4P16410 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.81■□□□□ 0.6
CTLA4P16410 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTLA4P16410 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.81■□□□□ 0.6
CTLA4P16410 AL136967.2-201ENST00000623968 743 ntBASIC18.81■□□□□ 0.6
CTLA4P16410 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTLA4P16410 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CTLA4P16410 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
CTLA4P16410 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
CTLA4P16410 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTLA4P16410 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTLA4P16410 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CTLA4P16410 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTLA4P16410 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTLA4P16410 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTLA4P16410 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CTLA4P16410 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTLA4P16410 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTLA4P16410 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTLA4P16410 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTLA4P16410 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.8■□□□□ 0.6
CTLA4P16410 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTLA4P16410 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTLA4P16410 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTLA4P16410 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTLA4P16410 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTLA4P16410 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.8■□□□□ 0.6
CTLA4P16410 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.8■□□□□ 0.6
CTLA4P16410 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTLA4P16410 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTLA4P16410 AC009237.3-201ENST00000393279 1427 ntBASIC18.8■□□□□ 0.6
CTLA4P16410 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTLA4P16410 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.8■□□□□ 0.6
CTLA4P16410 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CTLA4P16410 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.8■□□□□ 0.6
CTLA4P16410 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CTLA4P16410 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
CTLA4P16410 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CTLA4P16410 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.79■□□□□ 0.6
CTLA4P16410 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.79■□□□□ 0.6
CTLA4P16410 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTLA4P16410 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTLA4P16410 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTLA4P16410 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.79■□□□□ 0.6
CTLA4P16410 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTLA4P16410 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTLA4P16410 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTLA4P16410 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTLA4P16410 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTLA4P16410 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.79■□□□□ 0.6
CTLA4P16410 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CTLA4P16410 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.79■□□□□ 0.6
CTLA4P16410 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTLA4P16410 MIR572-201ENST00000384983 95 ntBASIC18.79■□□□□ 0.6
CTLA4P16410 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTLA4P16410 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
CTLA4P16410 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CTLA4P16410 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTLA4P16410 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTLA4P16410 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CTLA4P16410 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.78■□□□□ 0.6
CTLA4P16410 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.78■□□□□ 0.6
CTLA4P16410 AL139246.5-201ENST00000606645 996 ntBASIC18.78■□□□□ 0.6
CTLA4P16410 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CTLA4P16410 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTLA4P16410 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.78■□□□□ 0.6
CTLA4P16410 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CTLA4P16410 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTLA4P16410 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.78■□□□□ 0.6
CTLA4P16410 AC055733.4-201ENST00000638462 1354 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms