Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 FGF8-207ENST00000618991 856 ntTSL 3 BASIC30.68■■■□□ 2.5
CHGAP10645 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC30.68■■■□□ 2.5
CHGAP10645 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CHGAP10645 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
CHGAP10645 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHGAP10645 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
CHGAP10645 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHGAP10645 ESRRAP1-201ENST00000400596 1257 ntBASIC30.67■■■□□ 2.5
CHGAP10645 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CHGAP10645 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHGAP10645 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CHGAP10645 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHGAP10645 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHGAP10645 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
CHGAP10645 AC087742.1-201ENST00000575880 1738 ntBASIC30.67■■■□□ 2.5
CHGAP10645 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHGAP10645 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHGAP10645 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC30.66■■■□□ 2.5
CHGAP10645 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHGAP10645 POU5F1P4-201ENST00000413175 1085 ntBASIC30.66■■■□□ 2.5
CHGAP10645 DUSP5P2-201ENST00000426873 1033 ntBASIC30.66■■■□□ 2.5
CHGAP10645 AC098590.1-201ENST00000468126 897 ntBASIC30.66■■■□□ 2.5
CHGAP10645 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC30.66■■■□□ 2.5
CHGAP10645 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CHGAP10645 MYC-209ENST00000641252 345 ntBASIC30.66■■■□□ 2.5
CHGAP10645 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHGAP10645 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC30.66■■■□□ 2.5
CHGAP10645 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC30.66■■■□□ 2.5
CHGAP10645 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CHGAP10645 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC30.65■■■□□ 2.5
CHGAP10645 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHGAP10645 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC30.65■■■□□ 2.5
CHGAP10645 ISCU-212ENST00000547005 795 ntTSL 3 BASIC30.65■■■□□ 2.5
CHGAP10645 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC30.65■■■□□ 2.5
CHGAP10645 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CHGAP10645 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CHGAP10645 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC30.65■■■□□ 2.5
CHGAP10645 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
CHGAP10645 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHGAP10645 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CHGAP10645 RBM17P2-201ENST00000616397 1405 ntBASIC30.64■■■□□ 2.5
CHGAP10645 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC30.64■■■□□ 2.5
CHGAP10645 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHGAP10645 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHGAP10645 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CHGAP10645 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC30.64■■■□□ 2.5
CHGAP10645 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC30.64■■■□□ 2.5
CHGAP10645 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHGAP10645 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHGAP10645 AC010980.2-201ENST00000587099 1412 ntBASIC30.64■■■□□ 2.49
CHGAP10645 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHGAP10645 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHGAP10645 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
CHGAP10645 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC30.63■■■□□ 2.49
CHGAP10645 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC30.63■■■□□ 2.49
CHGAP10645 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
CHGAP10645 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHGAP10645 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC30.63■■■□□ 2.49
CHGAP10645 AC091874.3-201ENST00000512672 1195 ntBASIC30.63■■■□□ 2.49
CHGAP10645 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC30.63■■■□□ 2.49
CHGAP10645 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC30.63■■■□□ 2.49
CHGAP10645 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC30.63■■■□□ 2.49
CHGAP10645 AL591742.1-201ENST00000604433 565 ntBASIC30.63■■■□□ 2.49
CHGAP10645 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHGAP10645 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC30.63■■■□□ 2.49
CHGAP10645 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
CHGAP10645 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHGAP10645 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHGAP10645 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHGAP10645 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC30.62■■■□□ 2.49
CHGAP10645 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
CHGAP10645 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CHGAP10645 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC30.62■■■□□ 2.49
CHGAP10645 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CHGAP10645 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC30.62■■■□□ 2.49
CHGAP10645 AC061975.6-201ENST00000579045 1553 ntBASIC30.62■■■□□ 2.49
CHGAP10645 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHGAP10645 OR2A1-AS1-201ENST00000462305 773 ntBASIC30.61■■■□□ 2.49
CHGAP10645 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC30.61■■■□□ 2.49
CHGAP10645 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC30.61■■■□□ 2.49
CHGAP10645 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHGAP10645 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CHGAP10645 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CHGAP10645 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC30.6■■■□□ 2.49
CHGAP10645 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC30.6■■■□□ 2.49
CHGAP10645 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC30.6■■■□□ 2.49
CHGAP10645 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC30.6■■■□□ 2.49
CHGAP10645 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC30.6■■■□□ 2.49
CHGAP10645 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC30.6■■■□□ 2.49
CHGAP10645 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CHGAP10645 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC30.6■■■□□ 2.49
CHGAP10645 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CHGAP10645 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHGAP10645 RARG-204ENST00000543726 1779 ntTSL 2 BASIC30.59■■■□□ 2.49
CHGAP10645 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC30.59■■■□□ 2.49
CHGAP10645 ADM-205ENST00000528544 586 ntTSL 2 BASIC30.59■■■□□ 2.49
CHGAP10645 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC30.59■■■□□ 2.49
CHGAP10645 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC30.59■■■□□ 2.49
CHGAP10645 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC30.59■■■□□ 2.49
CHGAP10645 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms