Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MT-ND4P03905 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
MT-ND4P03905 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND4P03905 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
MT-ND4P03905 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
MT-ND4P03905 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
MT-ND4P03905 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND4P03905 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND4P03905 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND4P03905 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND4P03905 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
MT-ND4P03905 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.38■□□□□ 0.53
MT-ND4P03905 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND4P03905 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.38■□□□□ 0.53
MT-ND4P03905 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
MT-ND4P03905 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.38■□□□□ 0.53
MT-ND4P03905 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND4P03905 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND4P03905 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
MT-ND4P03905 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
MT-ND4P03905 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND4P03905 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.38■□□□□ 0.53
MT-ND4P03905 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND4P03905 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND4P03905 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.38■□□□□ 0.53
MT-ND4P03905 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
MT-ND4P03905 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND4P03905 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND4P03905 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
MT-ND4P03905 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND4P03905 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND4P03905 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MT-ND4P03905 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND4P03905 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND4P03905 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MT-ND4P03905 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND4P03905 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND4P03905 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.37■□□□□ 0.53
MT-ND4P03905 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MT-ND4P03905 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND4P03905 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND4P03905 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND4P03905 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.37■□□□□ 0.53
MT-ND4P03905 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND4P03905 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND4P03905 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MT-ND4P03905 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND4P03905 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND4P03905 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND4P03905 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.37■□□□□ 0.53
MT-ND4P03905 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND4P03905 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MT-ND4P03905 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND4P03905 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND4P03905 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
MT-ND4P03905 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND4P03905 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.36■□□□□ 0.53
MT-ND4P03905 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.36■□□□□ 0.53
MT-ND4P03905 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.36■□□□□ 0.53
MT-ND4P03905 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND4P03905 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND4P03905 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
MT-ND4P03905 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND4P03905 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND4P03905 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND4P03905 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND4P03905 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
MT-ND4P03905 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND4P03905 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND4P03905 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND4P03905 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND4P03905 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND4P03905 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND4P03905 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND4P03905 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.35■□□□□ 0.53
MT-ND4P03905 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND4P03905 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
MT-ND4P03905 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
MT-ND4P03905 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
MT-ND4P03905 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND4P03905 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND4P03905 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND4P03905 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND4P03905 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.34■□□□□ 0.53
MT-ND4P03905 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.34■□□□□ 0.53
MT-ND4P03905 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
MT-ND4P03905 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
MT-ND4P03905 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.34■□□□□ 0.53
MT-ND4P03905 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND4P03905 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.34■□□□□ 0.53
MT-ND4P03905 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
MT-ND4P03905 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND4P03905 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND4P03905 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.34■□□□□ 0.53
MT-ND4P03905 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
MT-ND4P03905 AC004687.1-201ENST00000579003 1625 ntBASIC18.34■□□□□ 0.53
MT-ND4P03905 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND4P03905 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND4P03905 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND4P03905 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms