Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHRNA1P02708 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.23■■□□□ 1.31
CHRNA1P02708 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHRNA1P02708 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CHRNA1P02708 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.23■■□□□ 1.31
CHRNA1P02708 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CHRNA1P02708 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.23■■□□□ 1.31
CHRNA1P02708 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.23■■□□□ 1.31
CHRNA1P02708 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.23■■□□□ 1.31
CHRNA1P02708 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHRNA1P02708 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHRNA1P02708 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.22■■□□□ 1.31
CHRNA1P02708 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHRNA1P02708 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHRNA1P02708 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CHRNA1P02708 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHRNA1P02708 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.22■■□□□ 1.31
CHRNA1P02708 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.22■■□□□ 1.31
CHRNA1P02708 AC069236.1-201ENST00000604339 616 ntBASIC23.22■■□□□ 1.31
CHRNA1P02708 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.22■■□□□ 1.31
CHRNA1P02708 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CHRNA1P02708 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHRNA1P02708 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.22■■□□□ 1.31
CHRNA1P02708 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHRNA1P02708 RBM17P2-201ENST00000616397 1405 ntBASIC23.22■■□□□ 1.31
CHRNA1P02708 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHRNA1P02708 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CHRNA1P02708 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHRNA1P02708 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHRNA1P02708 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHRNA1P02708 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
CHRNA1P02708 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.21■■□□□ 1.31
CHRNA1P02708 AC008694.1-202ENST00000636953 945 ntBASIC23.21■■□□□ 1.31
CHRNA1P02708 AC066615.1-201ENST00000640911 628 ntBASIC23.21■■□□□ 1.31
CHRNA1P02708 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CHRNA1P02708 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHRNA1P02708 AC061975.6-201ENST00000579045 1553 ntBASIC23.21■■□□□ 1.31
CHRNA1P02708 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.21■■□□□ 1.31
CHRNA1P02708 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHRNA1P02708 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHRNA1P02708 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHRNA1P02708 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHRNA1P02708 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CHRNA1P02708 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHRNA1P02708 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHRNA1P02708 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.2■■□□□ 1.3
CHRNA1P02708 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHRNA1P02708 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CHRNA1P02708 AC003102.1-202ENST00000563394 1796 ntBASIC23.2■■□□□ 1.3
CHRNA1P02708 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.2■■□□□ 1.3
CHRNA1P02708 KRT16P2-201ENST00000414673 1423 ntBASIC23.2■■□□□ 1.3
CHRNA1P02708 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHRNA1P02708 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.2■■□□□ 1.3
CHRNA1P02708 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.2■■□□□ 1.3
CHRNA1P02708 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHRNA1P02708 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.2■■□□□ 1.3
CHRNA1P02708 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHRNA1P02708 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHRNA1P02708 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHRNA1P02708 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.19■■□□□ 1.3
CHRNA1P02708 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHRNA1P02708 FAM201B-201ENST00000458407 597 ntBASIC23.19■■□□□ 1.3
CHRNA1P02708 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.19■■□□□ 1.3
CHRNA1P02708 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.19■■□□□ 1.3
CHRNA1P02708 AC092118.2-201ENST00000613495 667 ntBASIC23.19■■□□□ 1.3
CHRNA1P02708 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CHRNA1P02708 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHRNA1P02708 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.19■■□□□ 1.3
CHRNA1P02708 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CHRNA1P02708 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHRNA1P02708 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.18■■□□□ 1.3
CHRNA1P02708 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.18■■□□□ 1.3
CHRNA1P02708 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHRNA1P02708 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHRNA1P02708 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.18■■□□□ 1.3
CHRNA1P02708 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.18■■□□□ 1.3
CHRNA1P02708 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHRNA1P02708 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.18■■□□□ 1.3
CHRNA1P02708 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.18■■□□□ 1.3
CHRNA1P02708 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CHRNA1P02708 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CHRNA1P02708 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHRNA1P02708 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHRNA1P02708 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHRNA1P02708 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHRNA1P02708 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CHRNA1P02708 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHRNA1P02708 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHRNA1P02708 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.17■■□□□ 1.3
CHRNA1P02708 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHRNA1P02708 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.17■■□□□ 1.3
CHRNA1P02708 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHRNA1P02708 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.17■■□□□ 1.3
CHRNA1P02708 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHRNA1P02708 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHRNA1P02708 BX276092.2-201ENST00000417668 665 ntBASIC23.17■■□□□ 1.3
CHRNA1P02708 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHRNA1P02708 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.17■■□□□ 1.3
CHRNA1P02708 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.17■■□□□ 1.3
CHRNA1P02708 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms