Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB1P01920 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB1P01920 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DQB1P01920 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB1P01920 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQB1P01920 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB1P01920 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQB1P01920 AC005703.6-201ENST00000623265 1329 ntBASIC18.34■□□□□ 0.53
HLA-DQB1P01920 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB1P01920 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
HLA-DQB1P01920 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HLA-DQB1P01920 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB1P01920 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DQB1P01920 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB1P01920 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB1P01920 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DQB1P01920 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DQB1P01920 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQB1P01920 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQB1P01920 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.33■□□□□ 0.53
HLA-DQB1P01920 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DQB1P01920 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.33■□□□□ 0.53
HLA-DQB1P01920 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 AC018445.3-201ENST00000624177 1945 ntBASIC18.33■□□□□ 0.52
HLA-DQB1P01920 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DQB1P01920 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HLA-DQB1P01920 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 AC103834.1-201ENST00000520383 144 ntBASIC18.31■□□□□ 0.52
HLA-DQB1P01920 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
HLA-DQB1P01920 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HLA-DQB1P01920 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB1P01920 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.3■□□□□ 0.52
HLA-DQB1P01920 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB1P01920 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.3■□□□□ 0.52
HLA-DQB1P01920 AC137630.3-201ENST00000607245 391 ntBASIC18.3■□□□□ 0.52
HLA-DQB1P01920 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB1P01920 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB1P01920 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB1P01920 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-DQB1P01920 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HLA-DQB1P01920 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
HLA-DQB1P01920 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms