Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL355472.2-201ENST00000422958 438 ntBASIC21.59■■□□□ 1.05
PDGFBP01127 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDGFBP01127 AL162412.1-201ENST00000567129 965 ntBASIC21.59■■□□□ 1.05
PDGFBP01127 RN7SL471P-201ENST00000580476 299 ntBASIC21.59■■□□□ 1.05
PDGFBP01127 RBM17P2-201ENST00000616397 1405 ntBASIC21.59■■□□□ 1.05
PDGFBP01127 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDGFBP01127 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDGFBP01127 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PDGFBP01127 AC060766.5-201ENST00000590539 871 ntBASIC21.58■■□□□ 1.05
PDGFBP01127 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.58■■□□□ 1.05
PDGFBP01127 AC120498.10-201ENST00000621827 505 ntBASIC21.58■■□□□ 1.05
PDGFBP01127 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.58■■□□□ 1.05
PDGFBP01127 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.58■■□□□ 1.05
PDGFBP01127 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDGFBP01127 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.04
PDGFBP01127 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.58■■□□□ 1.04
PDGFBP01127 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDGFBP01127 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PDGFBP01127 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDGFBP01127 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.57■■□□□ 1.04
PDGFBP01127 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PDGFBP01127 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDGFBP01127 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDGFBP01127 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
PDGFBP01127 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
PDGFBP01127 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.57■■□□□ 1.04
PDGFBP01127 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.57■■□□□ 1.04
PDGFBP01127 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.57■■□□□ 1.04
PDGFBP01127 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDGFBP01127 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.57■■□□□ 1.04
PDGFBP01127 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDGFBP01127 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.57■■□□□ 1.04
PDGFBP01127 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.57■■□□□ 1.04
PDGFBP01127 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDGFBP01127 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.57■■□□□ 1.04
PDGFBP01127 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PDGFBP01127 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDGFBP01127 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDGFBP01127 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDGFBP01127 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDGFBP01127 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.56■■□□□ 1.04
PDGFBP01127 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDGFBP01127 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.56■■□□□ 1.04
PDGFBP01127 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.56■■□□□ 1.04
PDGFBP01127 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PDGFBP01127 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDGFBP01127 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.55■■□□□ 1.04
PDGFBP01127 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.55■■□□□ 1.04
PDGFBP01127 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.55■■□□□ 1.04
PDGFBP01127 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.55■■□□□ 1.04
PDGFBP01127 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.55■■□□□ 1.04
PDGFBP01127 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.55■■□□□ 1.04
PDGFBP01127 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.55■■□□□ 1.04
PDGFBP01127 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.55■■□□□ 1.04
PDGFBP01127 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDGFBP01127 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PDGFBP01127 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDGFBP01127 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDGFBP01127 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.55■■□□□ 1.04
PDGFBP01127 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDGFBP01127 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDGFBP01127 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDGFBP01127 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.54■■□□□ 1.04
PDGFBP01127 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDGFBP01127 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.54■■□□□ 1.04
PDGFBP01127 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDGFBP01127 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDGFBP01127 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
PDGFBP01127 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.54■■□□□ 1.04
PDGFBP01127 AC008175.2-201ENST00000612840 297 ntBASIC21.54■■□□□ 1.04
PDGFBP01127 HLA-B-256ENST00000639848 1089 ntBASIC21.54■■□□□ 1.04
PDGFBP01127 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDGFBP01127 AP006587.3-201ENST00000525742 1516 ntBASIC21.54■■□□□ 1.04
PDGFBP01127 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDGFBP01127 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDGFBP01127 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDGFBP01127 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDGFBP01127 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.53■■□□□ 1.04
PDGFBP01127 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PDGFBP01127 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDGFBP01127 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDGFBP01127 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.53■■□□□ 1.04
PDGFBP01127 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.53■■□□□ 1.04
PDGFBP01127 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.53■■□□□ 1.04
PDGFBP01127 KRT17P3-201ENST00000420566 1262 ntBASIC21.53■■□□□ 1.04
PDGFBP01127 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.53■■□□□ 1.04
PDGFBP01127 TSPY7P-201ENST00000431358 1114 ntBASIC21.53■■□□□ 1.04
PDGFBP01127 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDGFBP01127 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDGFBP01127 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.53■■□□□ 1.04
PDGFBP01127 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDGFBP01127 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.53■■□□□ 1.04
PDGFBP01127 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PDGFBP01127 AC133561.5-201ENST00000635547 218 ntBASIC21.53■■□□□ 1.04
PDGFBP01127 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PDGFBP01127 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDGFBP01127 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PDGFBP01127 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDGFBP01127 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDGFBP01127 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms