Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.96■□□□□ 0.95
NOBOXO60393 AC104187.1-201ENST00000607510 612 ntBASIC20.96■□□□□ 0.95
NOBOXO60393 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NOBOXO60393 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NOBOXO60393 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NOBOXO60393 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NOBOXO60393 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.96■□□□□ 0.95
NOBOXO60393 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NOBOXO60393 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NOBOXO60393 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NOBOXO60393 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NOBOXO60393 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NOBOXO60393 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.95■□□□□ 0.94
NOBOXO60393 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NOBOXO60393 KRT18P11-201ENST00000435214 1283 ntBASIC20.95■□□□□ 0.94
NOBOXO60393 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NOBOXO60393 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.95■□□□□ 0.94
NOBOXO60393 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NOBOXO60393 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NOBOXO60393 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NOBOXO60393 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NOBOXO60393 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NOBOXO60393 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NOBOXO60393 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NOBOXO60393 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NOBOXO60393 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.94■□□□□ 0.94
NOBOXO60393 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NOBOXO60393 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NOBOXO60393 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NOBOXO60393 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.94■□□□□ 0.94
NOBOXO60393 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NOBOXO60393 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NOBOXO60393 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NOBOXO60393 AP004607.7-201ENST00000527152 1677 ntBASIC20.93■□□□□ 0.94
NOBOXO60393 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NOBOXO60393 AC026185.1-201ENST00000445748 174 ntBASIC20.93■□□□□ 0.94
NOBOXO60393 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.93■□□□□ 0.94
NOBOXO60393 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.93■□□□□ 0.94
NOBOXO60393 AC011767.1-201ENST00000617410 1153 ntBASIC20.93■□□□□ 0.94
NOBOXO60393 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NOBOXO60393 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.93■□□□□ 0.94
NOBOXO60393 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.93■□□□□ 0.94
NOBOXO60393 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.93■□□□□ 0.94
NOBOXO60393 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NOBOXO60393 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOBOXO60393 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NOBOXO60393 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOBOXO60393 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NOBOXO60393 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NOBOXO60393 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.92■□□□□ 0.94
NOBOXO60393 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.92■□□□□ 0.94
NOBOXO60393 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.92■□□□□ 0.94
NOBOXO60393 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOBOXO60393 OR7E47P-201ENST00000546390 1422 ntBASIC20.92■□□□□ 0.94
NOBOXO60393 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NOBOXO60393 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOBOXO60393 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOBOXO60393 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOBOXO60393 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOBOXO60393 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.92■□□□□ 0.94
NOBOXO60393 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOBOXO60393 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NOBOXO60393 AL137060.1-201ENST00000618151 2648 ntBASIC20.91■□□□□ 0.94
NOBOXO60393 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NOBOXO60393 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
NOBOXO60393 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NOBOXO60393 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NOBOXO60393 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.91■□□□□ 0.94
NOBOXO60393 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
NOBOXO60393 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NOBOXO60393 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NOBOXO60393 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.91■□□□□ 0.94
NOBOXO60393 AL024507.2-201ENST00000606070 2574 ntBASIC20.91■□□□□ 0.94
NOBOXO60393 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.91■□□□□ 0.94
NOBOXO60393 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NOBOXO60393 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NOBOXO60393 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NOBOXO60393 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NOBOXO60393 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NOBOXO60393 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NOBOXO60393 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.9■□□□□ 0.94
NOBOXO60393 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.9■□□□□ 0.94
NOBOXO60393 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NOBOXO60393 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.9■□□□□ 0.94
NOBOXO60393 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.9■□□□□ 0.94
NOBOXO60393 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NOBOXO60393 AC242852.2-201ENST00000615738 1807 ntBASIC20.9■□□□□ 0.94
NOBOXO60393 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NOBOXO60393 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NOBOXO60393 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NOBOXO60393 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NOBOXO60393 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
NOBOXO60393 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
NOBOXO60393 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NOBOXO60393 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.89■□□□□ 0.93
NOBOXO60393 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NOBOXO60393 MFSD11-216ENST00000590393 1141 ntBASIC20.89■□□□□ 0.93
NOBOXO60393 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.89■□□□□ 0.93
NOBOXO60393 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NOBOXO60393 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms