Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFS4O43181 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFS4O43181 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFS4O43181 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFS4O43181 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFS4O43181 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.33■□□□□ 0.85
NDUFS4O43181 MIR935-201ENST00000401179 91 ntBASIC20.33■□□□□ 0.85
NDUFS4O43181 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
NDUFS4O43181 KRT18P14-201ENST00000534205 1250 ntBASIC20.33■□□□□ 0.85
NDUFS4O43181 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.33■□□□□ 0.85
NDUFS4O43181 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.33■□□□□ 0.85
NDUFS4O43181 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFS4O43181 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NDUFS4O43181 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.33■□□□□ 0.84
NDUFS4O43181 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.32■□□□□ 0.84
NDUFS4O43181 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS4O43181 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.32■□□□□ 0.84
NDUFS4O43181 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.32■□□□□ 0.84
NDUFS4O43181 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS4O43181 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS4O43181 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.32■□□□□ 0.84
NDUFS4O43181 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS4O43181 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.32■□□□□ 0.84
NDUFS4O43181 AC087623.3-201ENST00000607047 1098 ntBASIC20.32■□□□□ 0.84
NDUFS4O43181 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NDUFS4O43181 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NDUFS4O43181 PKD1P6-201ENST00000343738 4769 ntBASIC20.32■□□□□ 0.84
NDUFS4O43181 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS4O43181 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS4O43181 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFS4O43181 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS4O43181 AC244015.2-201ENST00000616358 1861 ntBASIC20.31■□□□□ 0.84
NDUFS4O43181 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS4O43181 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS4O43181 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS4O43181 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFS4O43181 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.31■□□□□ 0.84
NDUFS4O43181 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.31■□□□□ 0.84
NDUFS4O43181 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.31■□□□□ 0.84
NDUFS4O43181 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NDUFS4O43181 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NDUFS4O43181 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NDUFS4O43181 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.31■□□□□ 0.84
NDUFS4O43181 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NDUFS4O43181 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.3■□□□□ 0.84
NDUFS4O43181 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS4O43181 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NDUFS4O43181 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.3■□□□□ 0.84
NDUFS4O43181 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS4O43181 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.3■□□□□ 0.84
NDUFS4O43181 AC026271.2-201ENST00000428091 497 ntBASIC20.3■□□□□ 0.84
NDUFS4O43181 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.3■□□□□ 0.84
NDUFS4O43181 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS4O43181 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.3■□□□□ 0.84
NDUFS4O43181 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS4O43181 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFS4O43181 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.3■□□□□ 0.84
NDUFS4O43181 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.29■□□□□ 0.84
NDUFS4O43181 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.29■□□□□ 0.84
NDUFS4O43181 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.29■□□□□ 0.84
NDUFS4O43181 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFS4O43181 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.29■□□□□ 0.84
NDUFS4O43181 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFS4O43181 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.29■□□□□ 0.84
NDUFS4O43181 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
NDUFS4O43181 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.29■□□□□ 0.84
NDUFS4O43181 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFS4O43181 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFS4O43181 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
NDUFS4O43181 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFS4O43181 KRT87P-202ENST00000534226 1464 ntBASIC20.29■□□□□ 0.84
NDUFS4O43181 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
NDUFS4O43181 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFS4O43181 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS4O43181 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS4O43181 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS4O43181 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS4O43181 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS4O43181 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS4O43181 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS4O43181 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NDUFS4O43181 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.28■□□□□ 0.84
NDUFS4O43181 DUX4L2-201ENST00000561772 1275 ntBASIC20.28■□□□□ 0.84
NDUFS4O43181 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.28■□□□□ 0.84
NDUFS4O43181 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NDUFS4O43181 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
NDUFS4O43181 DUX4L6-201ENST00000626483 1275 ntBASIC20.28■□□□□ 0.84
NDUFS4O43181 DUX4L1-201ENST00000627662 1275 ntBASIC20.28■□□□□ 0.84
NDUFS4O43181 DUX4L8-201ENST00000629013 1275 ntBASIC20.28■□□□□ 0.84
NDUFS4O43181 DUX4L3-201ENST00000630187 1275 ntBASIC20.28■□□□□ 0.84
NDUFS4O43181 DUX4L7-201ENST00000630678 1275 ntBASIC20.28■□□□□ 0.84
NDUFS4O43181 DUX4L5-201ENST00000630834 1275 ntBASIC20.28■□□□□ 0.84
NDUFS4O43181 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.28■□□□□ 0.84
NDUFS4O43181 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.28■□□□□ 0.84
NDUFS4O43181 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS4O43181 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.28■□□□□ 0.84
NDUFS4O43181 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS4O43181 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.28■□□□□ 0.84
NDUFS4O43181 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFS4O43181 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms