Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.78■□□□□ 0.92
TMX2-CTNND1H3BSU7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.78■□□□□ 0.92
TMX2-CTNND1H3BSU7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMX2-CTNND1H3BSU7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMX2-CTNND1H3BSU7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TMX2-CTNND1H3BSU7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
TMX2-CTNND1H3BSU7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMX2-CTNND1H3BSU7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMX2-CTNND1H3BSU7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMX2-CTNND1H3BSU7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMX2-CTNND1H3BSU7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMX2-CTNND1H3BSU7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMX2-CTNND1H3BSU7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMX2-CTNND1H3BSU7 GPX1P1-201ENST00000388829 606 ntBASIC20.77■□□□□ 0.92
TMX2-CTNND1H3BSU7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
TMX2-CTNND1H3BSU7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMX2-CTNND1H3BSU7 AC073130.3-201ENST00000624389 2278 ntBASIC20.77■□□□□ 0.92
TMX2-CTNND1H3BSU7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TMX2-CTNND1H3BSU7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
TMX2-CTNND1H3BSU7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMX2-CTNND1H3BSU7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMX2-CTNND1H3BSU7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.76■□□□□ 0.91
TMX2-CTNND1H3BSU7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMX2-CTNND1H3BSU7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TMX2-CTNND1H3BSU7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMX2-CTNND1H3BSU7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMX2-CTNND1H3BSU7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.76■□□□□ 0.91
TMX2-CTNND1H3BSU7 AC231657.2-201ENST00000624556 255 ntBASIC20.76■□□□□ 0.91
TMX2-CTNND1H3BSU7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMX2-CTNND1H3BSU7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMX2-CTNND1H3BSU7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMX2-CTNND1H3BSU7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.76■□□□□ 0.91
TMX2-CTNND1H3BSU7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMX2-CTNND1H3BSU7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TMX2-CTNND1H3BSU7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMX2-CTNND1H3BSU7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
TMX2-CTNND1H3BSU7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.75■□□□□ 0.91
TMX2-CTNND1H3BSU7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.75■□□□□ 0.91
TMX2-CTNND1H3BSU7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMX2-CTNND1H3BSU7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.75■□□□□ 0.91
TMX2-CTNND1H3BSU7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.75■□□□□ 0.91
TMX2-CTNND1H3BSU7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.75■□□□□ 0.91
TMX2-CTNND1H3BSU7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
TMX2-CTNND1H3BSU7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.75■□□□□ 0.91
TMX2-CTNND1H3BSU7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMX2-CTNND1H3BSU7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMX2-CTNND1H3BSU7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMX2-CTNND1H3BSU7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 MIR663A-201ENST00000385250 93 ntBASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 AL355802.2-201ENST00000402069 882 ntBASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMX2-CTNND1H3BSU7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 AC104187.1-201ENST00000607510 612 ntBASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMX2-CTNND1H3BSU7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMX2-CTNND1H3BSU7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TMX2-CTNND1H3BSU7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMX2-CTNND1H3BSU7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMX2-CTNND1H3BSU7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TMX2-CTNND1H3BSU7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.72■□□□□ 0.91
TMX2-CTNND1H3BSU7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMX2-CTNND1H3BSU7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TMX2-CTNND1H3BSU7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TMX2-CTNND1H3BSU7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMX2-CTNND1H3BSU7 RNF165-205ENST00000588679 2904 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms