Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.3■□□□□ 0.68
NPIPA2E9PIF3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.3■□□□□ 0.68
NPIPA2E9PIF3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPA2E9PIF3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.3■□□□□ 0.68
NPIPA2E9PIF3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.3■□□□□ 0.68
NPIPA2E9PIF3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.3■□□□□ 0.68
NPIPA2E9PIF3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.3■□□□□ 0.68
NPIPA2E9PIF3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPA2E9PIF3 ECEL1P1-201ENST00000373592 1742 ntBASIC19.3■□□□□ 0.68
NPIPA2E9PIF3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPA2E9PIF3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NPIPA2E9PIF3 AC055733.4-201ENST00000638462 1354 ntBASIC19.3■□□□□ 0.68
NPIPA2E9PIF3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 LINC00526-201ENST00000581067 1875 ntBASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 AC006970.2-201ENST00000450065 779 ntBASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NPIPA2E9PIF3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 AC092053.2-201ENST00000640557 1818 ntBASIC19.28■□□□□ 0.68
NPIPA2E9PIF3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA2E9PIF3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.27■□□□□ 0.68
NPIPA2E9PIF3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA2E9PIF3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA2E9PIF3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA2E9PIF3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA2E9PIF3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
NPIPA2E9PIF3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA2E9PIF3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.27■□□□□ 0.68
NPIPA2E9PIF3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.27■□□□□ 0.68
NPIPA2E9PIF3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA2E9PIF3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.27■□□□□ 0.68
NPIPA2E9PIF3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.27■□□□□ 0.68
NPIPA2E9PIF3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA2E9PIF3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.27■□□□□ 0.67
NPIPA2E9PIF3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 CROCCP5-201ENST00000436658 830 ntBASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 AP001160.3-201ENST00000601484 763 ntBASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.26■□□□□ 0.67
NPIPA2E9PIF3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA2E9PIF3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA2E9PIF3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.25■□□□□ 0.67
NPIPA2E9PIF3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA2E9PIF3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.25■□□□□ 0.67
NPIPA2E9PIF3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.25■□□□□ 0.67
NPIPA2E9PIF3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA2E9PIF3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.25■□□□□ 0.67
NPIPA2E9PIF3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.25■□□□□ 0.67
NPIPA2E9PIF3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms