Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 AC096631.2-201ENST00000436136 790 ntBASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV4A0A0B4J268 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 IGHV3-19-201ENST00000521488 291 ntBASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 AC027682.1-201ENST00000562846 899 ntBASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV4A0A0B4J268 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 PBX2P1-201ENST00000493219 1291 ntBASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 AC133561.4-201ENST00000566112 224 ntBASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV4A0A0B4J268 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 EDA-201ENST00000338901 1233 ntBASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 AC008764.7-201ENST00000593779 1081 ntBASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 AC106739.1-201ENST00000617035 715 ntBASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV4A0A0B4J268 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV4A0A0B4J268 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms