Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV18A0A075B6X5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRAV18A0A075B6X5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV18A0A075B6X5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
TRAV18A0A075B6X5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
TRAV18A0A075B6X5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV18A0A075B6X5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV18A0A075B6X5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV18A0A075B6X5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 BX664725.1-201ENST00000438252 379 ntBASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV18A0A075B6X5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRAV18A0A075B6X5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRAV18A0A075B6X5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRAV18A0A075B6X5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV18A0A075B6X5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV18A0A075B6X5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV18A0A075B6X5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV18A0A075B6X5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRAV18A0A075B6X5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV18A0A075B6X5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV18A0A075B6X5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV18A0A075B6X5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV18A0A075B6X5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV18A0A075B6X5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRAV18A0A075B6X5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV18A0A075B6X5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms