Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CTCFL-221ENST00000608903 2135 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 AL355994.5-201ENST00000613591 236 ntBASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 AC012186.3-201ENST00000623850 485 ntBASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 AC005906.2-216ENST00000638736 1212 ntTSL 5 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 AL354702.2-203ENST00000641963 514 ntBASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 SMARCAL1-201ENST00000357276 3271 ntAPPRIS P2 TSL 2 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 YEATS4-201ENST00000247843 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 AP001189.1-201ENST00000447519 1426 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 AL358472.2-201ENST00000608236 1418 ntBASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 TMEM69-201ENST00000372025 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 P4HA2-204ENST00000379100 2563 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 P4HA2-205ENST00000379104 2569 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 STAM-AS1-201ENST00000563601 2595 ntBASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 FAM222B-209ENST00000581407 4161 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 NPY1R-201ENST00000296533 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 AP000695.3-201ENST00000624669 1894 ntBASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 LDAH-202ENST00000381090 2045 ntTSL 5 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 ARHGEF9-233ENST00000637520 5682 ntTSL 5 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 UCP3-201ENST00000314032 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 PWP1-201ENST00000412830 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 SCN5A-204ENST00000414099 8303 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 TMEM198B-202ENST00000478241 2924 ntTSL 2 BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 CLN8-201ENST00000331222 7169 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 TNFRSF9-201ENST00000377507 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 IPO13-202ENST00000372343 3894 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
NPIPA3F8WFD2 MON2-214ENST00000641654 10382 ntBASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 TNXB-201ENST00000375244 13132 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 SEC24B-203ENST00000504968 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 TYK2-202ENST00000524462 3456 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 RRBP1-210ENST00000610403 3309 ntTSL 5 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 SPATA22-204ENST00000541913 1683 ntTSL 2 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 EGFR-211ENST00000638463 4735 ntTSL 5 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 AC012368.1-206ENST00000451350 1504 ntTSL 5 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 CLDN4-202ENST00000431918 4108 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 TLR5-201ENST00000366881 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 ADGRE5-203ENST00000358600 2751 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 ZNF423-205ENST00000562871 4514 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 GRPEL2-201ENST00000329271 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 BZW2-214ENST00000630952 1721 ntTSL 5 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 ENPEP-201ENST00000265162 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 INPP5K-203ENST00000406424 3194 ntTSL 5 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 U2AF1L4-202ENST00000378975 747 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 SCGB2B2-201ENST00000379204 426 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 TPD52L1-204ENST00000392482 1165 ntTSL 2 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 CD83P1-201ENST00000405625 572 ntBASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 PPP1R7-206ENST00000406106 965 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 AC130710.1-201ENST00000412381 642 ntTSL 3 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 AC016747.1-203ENST00000422740 595 ntTSL 2 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 AC005090.1-201ENST00000433356 575 ntTSL 4 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 IGHV4-31-201ENST00000438142 428 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 AL772155.2-201ENST00000443910 472 ntBASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 NME6-211ENST00000447314 621 ntTSL 3 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 AL033528.2-201ENST00000455431 849 ntTSL 3 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 RN7SL825P-201ENST00000471327 295 ntBASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 LINC01021-202ENST00000505775 946 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 AL135818.2-201ENST00000563574 705 ntBASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 HNRNPA3P11-201ENST00000564298 934 ntBASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 RPS15A-206ENST00000569083 1022 ntTSL 2 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 AC016773.1-201ENST00000605571 802 ntBASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 AC007389.1-201ENST00000606978 1117 ntTSL 5 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 AC022296.3-201ENST00000608823 403 ntBASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 PAEP-209ENST00000611414 729 ntTSL 5 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 SEMA4G-212ENST00000613292 1171 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 CBWD1-222ENST00000613508 1143 ntTSL 5 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 LYZL6-203ENST00000618542 917 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 Metazoa_SRP.125-201ENST00000618659 283 ntBASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 IER3IP1-201ENST00000256433 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 FP565324.1-201ENST00000636427 3659 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 FAM153A-223ENST00000614127 1912 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 SYK-201ENST00000375746 4990 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 LHX6-203ENST00000373755 3384 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 ADGRG5-202ENST00000349457 3557 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 CNTN4-203ENST00000418658 5093 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 NR2E1-201ENST00000368983 2612 ntTSL 2 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 AP1G2-202ENST00000397120 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 BX005040.3-201ENST00000611332 1988 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 CLUHP3-207ENST00000563678 1303 ntBASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 MYL9-201ENST00000279022 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 FAM234B-201ENST00000197268 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 KLK2-203ENST00000391810 2674 ntTSL 2 BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 TCF19-201ENST00000376255 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 MRPS25-201ENST00000253686 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
NPIPA3F8WFD2 ATP6V1H-203ENST00000396774 1892 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
NPIPA3F8WFD2 TRAF3IP3-205ENST00000400959 1854 ntTSL 5 BASIC10.27□□□□□ -0.76
NPIPA3F8WFD2 TIMELESS-203ENST00000553532 5121 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
NPIPA3F8WFD2 KIF26B-201ENST00000366518 12113 ntTSL 5 BASIC10.27□□□□□ -0.76
NPIPA3F8WFD2 C3orf20-201ENST00000253697 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
NPIPA3F8WFD2 BCL2L13-201ENST00000317582 2992 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
NPIPA3F8WFD2 ASNS-203ENST00000394309 2289 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
NPIPA3F8WFD2 C3orf14-206ENST00000494481 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 CELF4-212ENST00000588597 1444 ntTSL 2 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 KBTBD12-201ENST00000343941 4121 ntTSL 2 BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 MORC1-201ENST00000232603 3764 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 UHRF1-201ENST00000612630 4309 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NPIPA3F8WFD2 PLUT-201ENST00000499662 2518 ntTSL 3 BASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms