Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
P04436 TMEM159-202ENST00000261388 1812 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
P04436 L3MBTL4-201ENST00000317931 3560 ntTSL 5 BASIC10.36□□□□□ -0.75
P04436 MRPL21-201ENST00000362034 683 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 AC004832.6-202ENST00000366413 696 ntBASIC10.36□□□□□ -0.75
P04436 MOG-217ENST00000376891 889 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 CNN2P4-201ENST00000396461 904 ntBASIC10.36□□□□□ -0.75
P04436 MOG-222ENST00000396701 910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 MOG-223ENST00000396704 675 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
P04436 AL392185.1-201ENST00000419620 395 ntTSL 2 BASIC10.36□□□□□ -0.75
P04436 ALG1L10P-201ENST00000437882 424 ntBASIC10.36□□□□□ -0.75
P04436 MT1HL1-201ENST00000464121 316 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
P04436 AL158801.1-201ENST00000488313 348 ntBASIC10.36□□□□□ -0.75
P04436 MOG-233ENST00000494692 958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 AC011362.1-201ENST00000507050 485 ntTSL 2 BASIC10.36□□□□□ -0.75
P04436 AC104051.1-201ENST00000520426 570 ntTSL 4 BASIC10.36□□□□□ -0.75
P04436 RAB30-203ENST00000525117 937 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 AC079329.1-201ENST00000527288 500 ntTSL 3 BASIC10.36□□□□□ -0.75
P04436 B2M-202ENST00000544417 933 ntTSL 5 BASIC10.36□□□□□ -0.75
P04436 AC011595.2-201ENST00000546640 1110 ntBASIC10.36□□□□□ -0.75
P04436 AC103740.2-201ENST00000557900 1225 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 AC009065.2-202ENST00000563284 506 ntTSL 3 BASIC10.36□□□□□ -0.75
P04436 LINC01570-202ENST00000566218 732 ntTSL 2 BASIC10.36□□□□□ -0.75
P04436 COX10-AS1-203ENST00000577798 936 ntTSL 3 BASIC10.36□□□□□ -0.75
P04436 AC005154.5-201ENST00000583191 368 ntTSL 2 BASIC10.36□□□□□ -0.75
P04436 AC069366.2-201ENST00000583643 430 ntBASIC10.36□□□□□ -0.75
P04436 POU5F1-208ENST00000620031 573 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 AL359741.1-201ENST00000621262 225 ntBASIC10.36□□□□□ -0.75
P04436 AC022167.5-203ENST00000637929 398 ntTSL 5 BASIC10.36□□□□□ -0.75
P04436 UTP3-201ENST00000254803 2073 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
P04436 FAM13C-202ENST00000435852 2088 ntTSL 2 BASIC10.36□□□□□ -0.75
P04436 FERMT2-205ENST00000553373 2064 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
P04436 ETFDH-201ENST00000307738 1903 ntTSL 2 BASIC10.36□□□□□ -0.75
P04436 ZMYND8-202ENST00000311275 5362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 BANK1-201ENST00000322953 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 SEC24C-201ENST00000339365 4513 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
P04436 AC005736.1-201ENST00000576810 1394 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 ZNF195-215ENST00000526601 2008 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
P04436 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
P04436 AC011479.3-201ENST00000594299 1890 ntBASIC10.36□□□□□ -0.75
P04436 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
P04436 AC007216.3-201ENST00000568144 1495 ntBASIC10.36□□□□□ -0.75
P04436 AC009120.6-201ENST00000616116 1460 ntBASIC10.36□□□□□ -0.75
P04436 BRD4-203ENST00000371835 4624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 SYNPO2-201ENST00000307142 7295 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 LRRCC1-201ENST00000360375 3813 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 IMMT-207ENST00000449247 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 SLC22A8-202ENST00000336232 2178 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 LINC02267-201ENST00000513393 1687 ntTSL 3 BASIC10.35□□□□□ -0.75
P04436 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 LINC02052-202ENST00000427914 2285 ntTSL 2 BASIC10.35□□□□□ -0.75
P04436 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 SLC10A1-201ENST00000216540 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 CPNE8-203ENST00000538596 2875 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 GABRB3-204ENST00000541819 5934 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 UHRF1-201ENST00000612630 4309 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
P04436 C9orf85-201ENST00000334731 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 LUADT1-201ENST00000359838 453 ntTSL 5 BASIC10.35□□□□□ -0.75
P04436 U2AF1L4-202ENST00000378975 747 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 AL354707.2-201ENST00000412339 422 ntTSL 2 BASIC10.35□□□□□ -0.75
P04436 AL136531.1-201ENST00000412497 480 ntTSL 3 BASIC10.35□□□□□ -0.75
P04436 PACRG-AS3-201ENST00000419182 1131 ntTSL 2 BASIC10.35□□□□□ -0.75
P04436 MT1P3-201ENST00000421424 177 ntBASIC10.35□□□□□ -0.75
P04436 Metazoa_SRP.10-201ENST00000422908 238 ntBASIC10.35□□□□□ -0.75
P04436 HNRNPA1P15-201ENST00000444886 960 ntBASIC10.35□□□□□ -0.75
P04436 AL353596.1-201ENST00000447508 790 ntTSL 2 BASIC10.35□□□□□ -0.75
P04436 PRAMEF35P-201ENST00000458709 891 ntBASIC10.35□□□□□ -0.75
P04436 THOC7-204ENST00000469584 836 ntTSL 2 BASIC10.35□□□□□ -0.75
P04436 RN7SL824P-201ENST00000470692 297 ntBASIC10.35□□□□□ -0.75
P04436 RN7SL825P-201ENST00000471327 295 ntBASIC10.35□□□□□ -0.75
P04436 TCP10L-202ENST00000472557 732 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
P04436 AC116049.1-201ENST00000505282 385 ntBASIC10.35□□□□□ -0.75
P04436 AC145098.1-201ENST00000506025 434 ntTSL 3 BASIC10.35□□□□□ -0.75
P04436 SCARNA16.1-201ENST00000516133 183 ntBASIC10.35□□□□□ -0.75
P04436 AC233992.1-201ENST00000525023 444 ntTSL 2 BASIC10.35□□□□□ -0.75
P04436 DHRS7-202ENST00000536410 1194 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 AC034102.6-202ENST00000549438 882 ntTSL 3 BASIC10.35□□□□□ -0.75
P04436 AC019254.2-201ENST00000560938 556 ntTSL 2 BASIC10.35□□□□□ -0.75
P04436 AC120114.5-201ENST00000562285 556 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
P04436 DOCK9-AS2-201ENST00000562781 807 ntBASIC10.35□□□□□ -0.75
P04436 AC011773.4-202ENST00000566000 1264 ntBASIC10.35□□□□□ -0.75
P04436 AP003396.5-201ENST00000578216 632 ntTSL 5 BASIC10.35□□□□□ -0.75
P04436 MIR4537-201ENST00000581717 70 ntBASIC10.35□□□□□ -0.75
P04436 MIR4673-201ENST00000584777 59 ntBASIC10.35□□□□□ -0.75
P04436 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC10.35□□□□□ -0.75
P04436 AC027644.3-201ENST00000607978 557 ntBASIC10.35□□□□□ -0.75
P04436 PAEP-209ENST00000611414 729 ntTSL 5 BASIC10.35□□□□□ -0.75
P04436 AL158850.2-204ENST00000616537 1188 ntTSL 5 BASIC10.35□□□□□ -0.75
P04436 AP000711.1-201ENST00000624964 917 ntBASIC10.35□□□□□ -0.75
P04436 KRTAP9-1-203ENST00000634358 330 ntTSL 5 BASIC10.35□□□□□ -0.75
P04436 GALNT11-208ENST00000434507 2747 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
P04436 ZNF330-201ENST00000262990 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms