Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 KCNJ15-206ENST00000398932 2747 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 LINC01804-203ENST00000492352 1871 ntTSL 2 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 ENPP5-201ENST00000230565 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 DENND2A-210ENST00000537639 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 FCRL5-203ENST00000368190 2800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 SLC12A4-204ENST00000541864 3627 ntTSL 2 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 FBF1-212ENST00000636174 3626 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 CNDP2-202ENST00000324301 2349 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 LCTL-201ENST00000341509 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 NTRK2-204ENST00000359847 6646 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 MCF2L-202ENST00000375597 3413 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
NPIPA3F8WFD2 EIF4BP7-201ENST00000432307 1813 ntBASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 KIAA1147-201ENST00000482493 1847 ntTSL 5 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 URB2-201ENST00000258243 5613 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 BIVM-201ENST00000257336 3859 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 DLEU1-231ENST00000490577 2440 ntTSL 5 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 PPP6R3-203ENST00000393800 5093 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 ARL3-201ENST00000260746 3844 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 AC131649.1-201ENST00000569215 1313 ntBASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 AC107892.1-201ENST00000577382 2727 ntTSL 2 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 SNHG1-206ENST00000537925 1487 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 ZNF2-201ENST00000611147 1465 ntTSL 2 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 SLC35F4-201ENST00000339762 1779 ntTSL 5 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 CARD8-221ENST00000521613 1903 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 PBRM1-201ENST00000296302 5145 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 ARHGEF9-228ENST00000636926 5436 ntTSL 5 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 SSRP1-201ENST00000278412 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 RASGRP4-201ENST00000293062 2926 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 CD300LG-201ENST00000293396 988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 CD3D-201ENST00000300692 861 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 SLC22A8-202ENST00000336232 2178 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 KRTAP4-5-201ENST00000343246 879 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 RFPL3S-203ENST00000400234 1295 ntAPPRIS P5 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 PES1-203ENST00000402281 2760 ntTSL 2 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 GNLY-202ENST00000409696 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 TDGF1P2-201ENST00000413322 562 ntBASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 AC112778.1-201ENST00000433306 827 ntBASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 RASGRP4-203ENST00000433821 2941 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 LINC01005-201ENST00000441691 540 ntTSL 4 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 CCT6P1-203ENST00000443108 1170 ntTSL 2 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 AL627082.1-201ENST00000443847 235 ntBASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 SNHG11-211ENST00000444816 621 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 AC108472.1-201ENST00000447277 618 ntTSL 3 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 PRDX2P2-201ENST00000451920 587 ntBASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 PPP1R26-AS1-201ENST00000455039 643 ntTSL 4 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 SNHG11-214ENST00000457218 880 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 MYADML-202ENST00000490394 797 ntTSL 3 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 CLDN24-201ENST00000514470 663 ntBASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 AC093827.3-201ENST00000514631 1110 ntBASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 ADAMTS12-206ENST00000515401 1003 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 IGLV3-2-201ENST00000519345 229 ntBASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 NAV2-AS4-201ENST00000532874 1181 ntTSL 5 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 CLDN24-202ENST00000541814 663 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 LINC01405-203ENST00000548368 705 ntTSL 3 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 FAM174B-206ENST00000555696 548 ntAPPRIS ALT2 TSL 4 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 AC083801.2-201ENST00000565024 1180 ntBASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 FRG2DP-203ENST00000569028 1570 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 AC135776.3-201ENST00000570988 427 ntBASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 AURKB-204ENST00000578549 939 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 SNHG5-212ENST00000589187 568 ntTSL 4 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 ZNF2-203ENST00000614034 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 RASGRP4-215ENST00000614135 2942 ntTSL 5 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 RASGRP4-218ENST00000617966 2927 ntTSL 5 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 AC005943.2-201ENST00000624421 148 ntBASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 AC073911.2-201ENST00000624989 468 ntBASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 APP-201ENST00000346798 3467 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 ZNF154-202ENST00000512439 5687 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 PJA1-204ENST00000374584 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 CLSTN3-201ENST00000266546 4185 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 AL031686.1-201ENST00000472805 3876 ntTSL 5 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 L3MBTL4-201ENST00000317931 3560 ntTSL 5 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 ANAPC10-217ENST00000613466 1674 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 AKAP1-206ENST00000571629 3105 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 AC005736.1-201ENST00000576810 1394 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 PPARD-205ENST00000448077 3516 ntTSL 2 BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 AKT1-202ENST00000402615 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 POM121L1P-201ENST00000402027 1934 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 NRAV-201ENST00000500741 1901 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 ZNF436-202ENST00000374608 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
NPIPA3F8WFD2 STK36-207ENST00000440309 4721 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 IL18R1-203ENST00000409599 3854 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 UCP1-201ENST00000262999 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 MYO1F-222ENST00000613525 4296 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 ZNF609-201ENST00000326648 8746 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 FAM53C-201ENST00000239906 4377 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 TWNK-201ENST00000311916 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 ZNF566-204ENST00000434377 5197 ntAPPRIS P3 TSL 2 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 UPK1B-201ENST00000264234 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 RRN3P2-202ENST00000564580 2132 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 THAP5-201ENST00000313516 1568 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 HADHB-202ENST00000405867 1588 ntTSL 5 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 OSBPL9-213ENST00000486942 2529 ntTSL 2 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 PNMA6F-201ENST00000436629 3348 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
NPIPA3F8WFD2 CSPG4P4Y-201ENST00000333235 3724 ntBASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms