Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRB4X5D2U9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRB4X5D2U9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRB4X5D2U9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRB4X5D2U9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRB4X5D2U9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DRB4X5D2U9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRB4X5D2U9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DRB4X5D2U9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DRB4X5D2U9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DRB4X5D2U9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DRB4X5D2U9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
HLA-DRB4X5D2U9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 AC005837.3-201ENST00000612163 286 ntBASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DRB4X5D2U9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 MIR638-201ENST00000385237 100 ntBASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 SMUG1P1-201ENST00000590640 811 ntBASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 FAM99A-202ENST00000538190 1989 ntBASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DRB4X5D2U9 AC092667.1-201ENST00000434301 2586 ntBASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DRB4X5D2U9 AP004607.7-201ENST00000527152 1677 ntBASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 MIR572-201ENST00000384983 95 ntBASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DRB4X5D2U9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms