Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 TERF1P2-201ENST00000583350 1212 ntBASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 AC092053.2-201ENST00000640557 1818 ntBASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCA3PQ9Y6N3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 KRT18P14-201ENST00000534205 1250 ntBASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.03■□□□□ 0.8
CLCA3PQ9Y6N3 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLCA3PQ9Y6N3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.02■□□□□ 0.79
CLCA3PQ9Y6N3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CLCA3PQ9Y6N3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCA3PQ9Y6N3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CLCA3PQ9Y6N3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCA3PQ9Y6N3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCA3PQ9Y6N3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.01■□□□□ 0.79
CLCA3PQ9Y6N3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCA3PQ9Y6N3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.01■□□□□ 0.79
CLCA3PQ9Y6N3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.01■□□□□ 0.79
CLCA3PQ9Y6N3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCA3PQ9Y6N3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CLCA3PQ9Y6N3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCA3PQ9Y6N3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCA3PQ9Y6N3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCA3PQ9Y6N3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCA3PQ9Y6N3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20■□□□□ 0.79
CLCA3PQ9Y6N3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms