Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 AP004607.7-201ENST00000527152 1677 ntBASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 AL121603.2-201ENST00000557373 2117 ntBASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 AC026471.6-201ENST00000622954 1905 ntBASIC19.61■□□□□ 0.73
HRH3Q9Y5N1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HRH3Q9Y5N1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.6■□□□□ 0.73
HRH3Q9Y5N1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HRH3Q9Y5N1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.6■□□□□ 0.73
HRH3Q9Y5N1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HRH3Q9Y5N1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HRH3Q9Y5N1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HRH3Q9Y5N1 AP004607.4-201ENST00000530158 1459 ntBASIC19.6■□□□□ 0.73
HRH3Q9Y5N1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.6■□□□□ 0.73
HRH3Q9Y5N1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.59■□□□□ 0.73
HRH3Q9Y5N1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.59■□□□□ 0.73
HRH3Q9Y5N1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.59■□□□□ 0.73
HRH3Q9Y5N1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HRH3Q9Y5N1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.59■□□□□ 0.73
HRH3Q9Y5N1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HRH3Q9Y5N1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.59■□□□□ 0.73
HRH3Q9Y5N1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.59■□□□□ 0.73
HRH3Q9Y5N1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.59■□□□□ 0.73
HRH3Q9Y5N1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.59■□□□□ 0.73
HRH3Q9Y5N1 AC005224.4-201ENST00000583262 1652 ntBASIC19.59■□□□□ 0.73
HRH3Q9Y5N1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HRH3Q9Y5N1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HRH3Q9Y5N1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HRH3Q9Y5N1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HRH3Q9Y5N1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HRH3Q9Y5N1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.58■□□□□ 0.73
HRH3Q9Y5N1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HRH3Q9Y5N1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HRH3Q9Y5N1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HRH3Q9Y5N1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.58■□□□□ 0.73
HRH3Q9Y5N1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.58■□□□□ 0.72
HRH3Q9Y5N1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HRH3Q9Y5N1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.58■□□□□ 0.72
HRH3Q9Y5N1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.58■□□□□ 0.72
HRH3Q9Y5N1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 AC055733.4-201ENST00000638462 1354 ntBASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 EP400NL-214ENST00000641289 2402 ntBASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 AC006015.1-201ENST00000429970 570 ntBASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HRH3Q9Y5N1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 AC242852.2-201ENST00000615738 1807 ntBASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 ID1-201ENST00000376105 1233 ntBASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 AC004854.2-201ENST00000608450 1441 ntBASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HRH3Q9Y5N1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HRH3Q9Y5N1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.55■□□□□ 0.72
HRH3Q9Y5N1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HRH3Q9Y5N1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms