Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB1Q9Y5F3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB1Q9Y5F3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB1Q9Y5F3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB1Q9Y5F3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.29■■□□□ 1
PCDHB1Q9Y5F3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.29■■□□□ 1
PCDHB1Q9Y5F3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB1Q9Y5F3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
PCDHB1Q9Y5F3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PCDHB1Q9Y5F3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.29■■□□□ 1
PCDHB1Q9Y5F3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.29■■□□□ 1
PCDHB1Q9Y5F3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB1Q9Y5F3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB1Q9Y5F3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB1Q9Y5F3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB1Q9Y5F3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB1Q9Y5F3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB1Q9Y5F3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHB1Q9Y5F3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHB1Q9Y5F3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PCDHB1Q9Y5F3 AC006015.1-201ENST00000429970 570 ntBASIC21.27■■□□□ 1
PCDHB1Q9Y5F3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHB1Q9Y5F3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB1Q9Y5F3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.27■■□□□ 1
PCDHB1Q9Y5F3 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.27■■□□□ 1
PCDHB1Q9Y5F3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.27■■□□□ 1
PCDHB1Q9Y5F3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHB1Q9Y5F3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHB1Q9Y5F3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHB1Q9Y5F3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB1Q9Y5F3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
PCDHB1Q9Y5F3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB1Q9Y5F3 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.26■□□□□ 0.99
PCDHB1Q9Y5F3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB1Q9Y5F3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB1Q9Y5F3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB1Q9Y5F3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PCDHB1Q9Y5F3 AP004607.7-201ENST00000527152 1677 ntBASIC21.26■□□□□ 0.99
PCDHB1Q9Y5F3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHB1Q9Y5F3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDHB1Q9Y5F3 SMUG1P1-201ENST00000590640 811 ntBASIC21.26■□□□□ 0.99
PCDHB1Q9Y5F3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDHB1Q9Y5F3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHB1Q9Y5F3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 AC016769.1-201ENST00000409132 1010 ntBASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 AC137761.2-201ENST00000561729 223 ntBASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 AC145350.3-201ENST00000569033 163 ntBASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 RAP2CP1-201ENST00000605103 478 ntBASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHB1Q9Y5F3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 CDCA4P2-201ENST00000441182 718 ntBASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 AC073111.5-205ENST00000641717 521 ntBASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHB1Q9Y5F3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms