Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHB3Q9Y5E6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB3Q9Y5E6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB3Q9Y5E6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB3Q9Y5E6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDHB3Q9Y5E6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHB3Q9Y5E6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB3Q9Y5E6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PCDHB3Q9Y5E6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB3Q9Y5E6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PCDHB3Q9Y5E6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB3Q9Y5E6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB3Q9Y5E6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 AC092437.1-201ENST00000624794 1048 ntBASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB3Q9Y5E6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB3Q9Y5E6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB3Q9Y5E6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHB3Q9Y5E6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB3Q9Y5E6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB3Q9Y5E6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHB3Q9Y5E6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB3Q9Y5E6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB3Q9Y5E6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHB3Q9Y5E6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB3Q9Y5E6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHB3Q9Y5E6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.77■□□□□ 0.91
PCDHB3Q9Y5E6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
PCDHB3Q9Y5E6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHB3Q9Y5E6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
PCDHB3Q9Y5E6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PCDHB3Q9Y5E6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB3Q9Y5E6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB3Q9Y5E6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB3Q9Y5E6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PCDHB3Q9Y5E6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHB3Q9Y5E6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB3Q9Y5E6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB3Q9Y5E6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB3Q9Y5E6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PCDHB3Q9Y5E6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PCDHB3Q9Y5E6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB3Q9Y5E6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 AC010542.4-201ENST00000563151 1910 ntBASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 FAM99A-202ENST00000538190 1989 ntBASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHB3Q9Y5E6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 OXCT2P1-201ENST00000447263 1535 ntBASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHB3Q9Y5E6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB3Q9Y5E6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PCDHB3Q9Y5E6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB3Q9Y5E6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB3Q9Y5E6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PCDHB3Q9Y5E6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.73■□□□□ 0.91
PCDHB3Q9Y5E6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB3Q9Y5E6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB3Q9Y5E6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms