Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.39■■□□□ 1.5
PCDHA4Q9UN74 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA4Q9UN74 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA4Q9UN74 AC079140.4-201ENST00000507448 529 ntBASIC24.39■■□□□ 1.49
PCDHA4Q9UN74 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.39■■□□□ 1.49
PCDHA4Q9UN74 AC104564.3-201ENST00000582367 638 ntBASIC24.39■■□□□ 1.49
PCDHA4Q9UN74 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.39■■□□□ 1.49
PCDHA4Q9UN74 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
PCDHA4Q9UN74 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA4Q9UN74 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA4Q9UN74 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA4Q9UN74 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA4Q9UN74 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA4Q9UN74 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA4Q9UN74 AC087623.3-201ENST00000607047 1098 ntBASIC24.38■■□□□ 1.49
PCDHA4Q9UN74 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.38■■□□□ 1.49
PCDHA4Q9UN74 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA4Q9UN74 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDHA4Q9UN74 DUX4L2-201ENST00000561772 1275 ntBASIC24.37■■□□□ 1.49
PCDHA4Q9UN74 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.37■■□□□ 1.49
PCDHA4Q9UN74 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA4Q9UN74 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.37■■□□□ 1.49
PCDHA4Q9UN74 DUX4L6-201ENST00000626483 1275 ntBASIC24.37■■□□□ 1.49
PCDHA4Q9UN74 DUX4L1-201ENST00000627662 1275 ntBASIC24.37■■□□□ 1.49
PCDHA4Q9UN74 DUX4L8-201ENST00000629013 1275 ntBASIC24.37■■□□□ 1.49
PCDHA4Q9UN74 DUX4L3-201ENST00000630187 1275 ntBASIC24.37■■□□□ 1.49
PCDHA4Q9UN74 DUX4L7-201ENST00000630678 1275 ntBASIC24.37■■□□□ 1.49
PCDHA4Q9UN74 DUX4L5-201ENST00000630834 1275 ntBASIC24.37■■□□□ 1.49
PCDHA4Q9UN74 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDHA4Q9UN74 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA4Q9UN74 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA4Q9UN74 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA4Q9UN74 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA4Q9UN74 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA4Q9UN74 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA4Q9UN74 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDHA4Q9UN74 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDHA4Q9UN74 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
PCDHA4Q9UN74 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA4Q9UN74 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.36■■□□□ 1.49
PCDHA4Q9UN74 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA4Q9UN74 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA4Q9UN74 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA4Q9UN74 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA4Q9UN74 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA4Q9UN74 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.35■■□□□ 1.49
PCDHA4Q9UN74 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA4Q9UN74 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
PCDHA4Q9UN74 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA4Q9UN74 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDHA4Q9UN74 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.35■■□□□ 1.49
PCDHA4Q9UN74 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
PCDHA4Q9UN74 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA4Q9UN74 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA4Q9UN74 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PCDHA4Q9UN74 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 AC244015.2-201ENST00000616358 1861 ntBASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 KRT87P-202ENST00000534226 1464 ntBASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA4Q9UN74 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.33■■□□□ 1.49
PCDHA4Q9UN74 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.33■■□□□ 1.49
PCDHA4Q9UN74 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.33■■□□□ 1.49
PCDHA4Q9UN74 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.33■■□□□ 1.49
PCDHA4Q9UN74 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHA4Q9UN74 EEF1DP3-203ENST00000566025 782 ntBASIC24.33■■□□□ 1.49
PCDHA4Q9UN74 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHA4Q9UN74 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDHA4Q9UN74 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDHA4Q9UN74 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDHA4Q9UN74 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHA4Q9UN74 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHA4Q9UN74 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA4Q9UN74 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHA4Q9UN74 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA4Q9UN74 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA4Q9UN74 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDHA4Q9UN74 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
PCDHA4Q9UN74 AC034268.1-201ENST00000441047 882 ntBASIC24.32■■□□□ 1.48
PCDHA4Q9UN74 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA4Q9UN74 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.32■■□□□ 1.48
PCDHA4Q9UN74 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHA4Q9UN74 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA4Q9UN74 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA4Q9UN74 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA4Q9UN74 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA4Q9UN74 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms