Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLE3Q9NRF9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLE3Q9NRF9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
POLE3Q9NRF9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.74■□□□□ 0.75
POLE3Q9NRF9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.74■□□□□ 0.75
POLE3Q9NRF9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POLE3Q9NRF9 MIR939-201ENST00000401314 82 ntBASIC19.74■□□□□ 0.75
POLE3Q9NRF9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLE3Q9NRF9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.74■□□□□ 0.75
POLE3Q9NRF9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
POLE3Q9NRF9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLE3Q9NRF9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POLE3Q9NRF9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.74■□□□□ 0.75
POLE3Q9NRF9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.74■□□□□ 0.75
POLE3Q9NRF9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.74■□□□□ 0.75
POLE3Q9NRF9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLE3Q9NRF9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.73■□□□□ 0.75
POLE3Q9NRF9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLE3Q9NRF9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
POLE3Q9NRF9 AP006587.3-201ENST00000525742 1516 ntBASIC19.73■□□□□ 0.75
POLE3Q9NRF9 AC026471.6-201ENST00000622954 1905 ntBASIC19.73■□□□□ 0.75
POLE3Q9NRF9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLE3Q9NRF9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.73■□□□□ 0.75
POLE3Q9NRF9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.73■□□□□ 0.75
POLE3Q9NRF9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.73■□□□□ 0.75
POLE3Q9NRF9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
POLE3Q9NRF9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 AC009237.3-201ENST00000393279 1427 ntBASIC19.72■□□□□ 0.75
POLE3Q9NRF9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 AF213884.3-201ENST00000563833 479 ntBASIC19.72■□□□□ 0.75
POLE3Q9NRF9 AL139246.5-201ENST00000606645 996 ntBASIC19.72■□□□□ 0.75
POLE3Q9NRF9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 TSPY26P-201ENST00000476365 1326 ntBASIC19.72■□□□□ 0.75
POLE3Q9NRF9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
POLE3Q9NRF9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
POLE3Q9NRF9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
POLE3Q9NRF9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLE3Q9NRF9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.71■□□□□ 0.75
POLE3Q9NRF9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLE3Q9NRF9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLE3Q9NRF9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.71■□□□□ 0.75
POLE3Q9NRF9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.71■□□□□ 0.75
POLE3Q9NRF9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.71■□□□□ 0.75
POLE3Q9NRF9 AL031432.3-201ENST00000607698 485 ntBASIC19.71■□□□□ 0.75
POLE3Q9NRF9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLE3Q9NRF9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.71■□□□□ 0.75
POLE3Q9NRF9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLE3Q9NRF9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLE3Q9NRF9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
POLE3Q9NRF9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 MIR572-201ENST00000384983 95 ntBASIC19.7■□□□□ 0.74
POLE3Q9NRF9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 AL136967.2-201ENST00000623968 743 ntBASIC19.7■□□□□ 0.74
POLE3Q9NRF9 AC105233.4-201ENST00000642045 216 ntBASIC19.7■□□□□ 0.74
POLE3Q9NRF9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
POLE3Q9NRF9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
POLE3Q9NRF9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLE3Q9NRF9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLE3Q9NRF9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLE3Q9NRF9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.69■□□□□ 0.74
POLE3Q9NRF9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
POLE3Q9NRF9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
POLE3Q9NRF9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
POLE3Q9NRF9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.69■□□□□ 0.74
POLE3Q9NRF9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.69■□□□□ 0.74
POLE3Q9NRF9 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.69■□□□□ 0.74
POLE3Q9NRF9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
POLE3Q9NRF9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.69■□□□□ 0.74
POLE3Q9NRF9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
POLE3Q9NRF9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms