Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.24■■□□□ 1.15
CD248Q9HCU0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.24■■□□□ 1.15
CD248Q9HCU0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD248Q9HCU0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD248Q9HCU0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.24■■□□□ 1.15
CD248Q9HCU0 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.24■■□□□ 1.15
CD248Q9HCU0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.24■■□□□ 1.15
CD248Q9HCU0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.24■■□□□ 1.15
CD248Q9HCU0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.24■■□□□ 1.15
CD248Q9HCU0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.24■■□□□ 1.15
CD248Q9HCU0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD248Q9HCU0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CD248Q9HCU0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CD248Q9HCU0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.24■■□□□ 1.15
CD248Q9HCU0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CD248Q9HCU0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CD248Q9HCU0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CD248Q9HCU0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CD248Q9HCU0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CD248Q9HCU0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CD248Q9HCU0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CD248Q9HCU0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.23■■□□□ 1.15
CD248Q9HCU0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CD248Q9HCU0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.23■■□□□ 1.15
CD248Q9HCU0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.23■■□□□ 1.15
CD248Q9HCU0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CD248Q9HCU0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CD248Q9HCU0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.22■■□□□ 1.15
CD248Q9HCU0 AC004687.1-201ENST00000579003 1625 ntBASIC22.22■■□□□ 1.15
CD248Q9HCU0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.22■■□□□ 1.15
CD248Q9HCU0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CD248Q9HCU0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.22■■□□□ 1.15
CD248Q9HCU0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CD248Q9HCU0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CD248Q9HCU0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.22■■□□□ 1.15
CD248Q9HCU0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.22■■□□□ 1.15
CD248Q9HCU0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CD248Q9HCU0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CD248Q9HCU0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
CD248Q9HCU0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD248Q9HCU0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
CD248Q9HCU0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD248Q9HCU0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CD248Q9HCU0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.21■■□□□ 1.15
CD248Q9HCU0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD248Q9HCU0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CD248Q9HCU0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
CD248Q9HCU0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CD248Q9HCU0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.2■■□□□ 1.15
CD248Q9HCU0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
CD248Q9HCU0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CD248Q9HCU0 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.2■■□□□ 1.14
CD248Q9HCU0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CD248Q9HCU0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CD248Q9HCU0 AC006015.1-201ENST00000429970 570 ntBASIC22.2■■□□□ 1.14
CD248Q9HCU0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.2■■□□□ 1.14
CD248Q9HCU0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CD248Q9HCU0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CD248Q9HCU0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CD248Q9HCU0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.2■■□□□ 1.14
CD248Q9HCU0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.2■■□□□ 1.14
CD248Q9HCU0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CD248Q9HCU0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CD248Q9HCU0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CD248Q9HCU0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CD248Q9HCU0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.2■■□□□ 1.14
CD248Q9HCU0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD248Q9HCU0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CD248Q9HCU0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD248Q9HCU0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CD248Q9HCU0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.19■■□□□ 1.14
CD248Q9HCU0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD248Q9HCU0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD248Q9HCU0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
CD248Q9HCU0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD248Q9HCU0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.19■■□□□ 1.14
CD248Q9HCU0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CD248Q9HCU0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD248Q9HCU0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CD248Q9HCU0 AL353803.4-201ENST00000565882 1934 ntBASIC22.19■■□□□ 1.14
CD248Q9HCU0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.19■■□□□ 1.14
CD248Q9HCU0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.19■■□□□ 1.14
CD248Q9HCU0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CD248Q9HCU0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CD248Q9HCU0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CD248Q9HCU0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CD248Q9HCU0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.18■■□□□ 1.14
CD248Q9HCU0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CD248Q9HCU0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.18■■□□□ 1.14
CD248Q9HCU0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CD248Q9HCU0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CD248Q9HCU0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CD248Q9HCU0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CD248Q9HCU0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CD248Q9HCU0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CD248Q9HCU0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.18■■□□□ 1.14
CD248Q9HCU0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CD248Q9HCU0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
CD248Q9HCU0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CD248Q9HCU0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms