Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD8Q9HCK8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.13■□□□□ 0.81
CHD8Q9HCK8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD8Q9HCK8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.13■□□□□ 0.81
CHD8Q9HCK8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.13■□□□□ 0.81
CHD8Q9HCK8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.13■□□□□ 0.81
CHD8Q9HCK8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.13■□□□□ 0.81
CHD8Q9HCK8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CHD8Q9HCK8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD8Q9HCK8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHD8Q9HCK8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CHD8Q9HCK8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.12■□□□□ 0.81
CHD8Q9HCK8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHD8Q9HCK8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.12■□□□□ 0.81
CHD8Q9HCK8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHD8Q9HCK8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHD8Q9HCK8 OXCT2P1-201ENST00000447263 1535 ntBASIC20.12■□□□□ 0.81
CHD8Q9HCK8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.11■□□□□ 0.81
CHD8Q9HCK8 KRT17P3-201ENST00000420566 1262 ntBASIC20.11■□□□□ 0.81
CHD8Q9HCK8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.11■□□□□ 0.81
CHD8Q9HCK8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.11■□□□□ 0.81
CHD8Q9HCK8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.11■□□□□ 0.81
CHD8Q9HCK8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.11■□□□□ 0.81
CHD8Q9HCK8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD8Q9HCK8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD8Q9HCK8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.11■□□□□ 0.81
CHD8Q9HCK8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD8Q9HCK8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD8Q9HCK8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD8Q9HCK8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD8Q9HCK8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD8Q9HCK8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD8Q9HCK8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD8Q9HCK8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD8Q9HCK8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD8Q9HCK8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD8Q9HCK8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD8Q9HCK8 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.1■□□□□ 0.81
CHD8Q9HCK8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.1■□□□□ 0.81
CHD8Q9HCK8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.1■□□□□ 0.81
CHD8Q9HCK8 AC145285.6-201ENST00000604632 637 ntBASIC20.1■□□□□ 0.81
CHD8Q9HCK8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.1■□□□□ 0.81
CHD8Q9HCK8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.1■□□□□ 0.81
CHD8Q9HCK8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHD8Q9HCK8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.09■□□□□ 0.81
CHD8Q9HCK8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD8Q9HCK8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD8Q9HCK8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD8Q9HCK8 KRT18P57-201ENST00000443599 1254 ntBASIC20.09■□□□□ 0.81
CHD8Q9HCK8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHD8Q9HCK8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD8Q9HCK8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CHD8Q9HCK8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD8Q9HCK8 AL121906.2-201ENST00000621597 723 ntBASIC20.09■□□□□ 0.81
CHD8Q9HCK8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD8Q9HCK8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CHD8Q9HCK8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHD8Q9HCK8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.09■□□□□ 0.81
CHD8Q9HCK8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.09■□□□□ 0.81
CHD8Q9HCK8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.09■□□□□ 0.81
CHD8Q9HCK8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD8Q9HCK8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD8Q9HCK8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.08■□□□□ 0.81
CHD8Q9HCK8 AP003071.4-201ENST00000562276 1284 ntBASIC20.08■□□□□ 0.81
CHD8Q9HCK8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CHD8Q9HCK8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.08■□□□□ 0.81
CHD8Q9HCK8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CHD8Q9HCK8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CHD8Q9HCK8 POM121L13P-201ENST00000422362 380 ntBASIC20.08■□□□□ 0.8
CHD8Q9HCK8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CHD8Q9HCK8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.08■□□□□ 0.8
CHD8Q9HCK8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD8Q9HCK8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD8Q9HCK8 KRT17P1-201ENST00000399211 1546 ntBASIC20.08■□□□□ 0.8
CHD8Q9HCK8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.08■□□□□ 0.8
CHD8Q9HCK8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 KRT126P-201ENST00000549467 1181 ntBASIC20.07■□□□□ 0.8
CHD8Q9HCK8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD8Q9HCK8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD8Q9HCK8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CHD8Q9HCK8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.06■□□□□ 0.8
CHD8Q9HCK8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.06■□□□□ 0.8
CHD8Q9HCK8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.06■□□□□ 0.8
CHD8Q9HCK8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms