Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
RTFDC1Q9BY42 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RTFDC1Q9BY42 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.08■■□□□ 1.77
RTFDC1Q9BY42 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RTFDC1Q9BY42 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
RTFDC1Q9BY42 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RTFDC1Q9BY42 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
RTFDC1Q9BY42 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RTFDC1Q9BY42 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RTFDC1Q9BY42 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RTFDC1Q9BY42 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
RTFDC1Q9BY42 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.07■■□□□ 1.76
RTFDC1Q9BY42 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.07■■□□□ 1.76
RTFDC1Q9BY42 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.07■■□□□ 1.76
RTFDC1Q9BY42 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.07■■□□□ 1.76
RTFDC1Q9BY42 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.07■■□□□ 1.76
RTFDC1Q9BY42 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
RTFDC1Q9BY42 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RTFDC1Q9BY42 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTFDC1Q9BY42 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTFDC1Q9BY42 DUSP5P2-201ENST00000426873 1033 ntBASIC26.06■■□□□ 1.76
RTFDC1Q9BY42 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.06■■□□□ 1.76
RTFDC1Q9BY42 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
RTFDC1Q9BY42 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RTFDC1Q9BY42 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RTFDC1Q9BY42 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTFDC1Q9BY42 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTFDC1Q9BY42 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.06■■□□□ 1.76
RTFDC1Q9BY42 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 GCSHP5-201ENST00000443090 522 ntBASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 AC097658.1-201ENST00000475555 843 ntBASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
RTFDC1Q9BY42 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RTFDC1Q9BY42 ESRRAP1-201ENST00000400596 1257 ntBASIC26.04■■□□□ 1.76
RTFDC1Q9BY42 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.04■■□□□ 1.76
RTFDC1Q9BY42 AC091874.3-201ENST00000512672 1195 ntBASIC26.04■■□□□ 1.76
RTFDC1Q9BY42 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
RTFDC1Q9BY42 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RTFDC1Q9BY42 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RTFDC1Q9BY42 POU5F1P4-201ENST00000413175 1085 ntBASIC26.03■■□□□ 1.76
RTFDC1Q9BY42 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC26.03■■□□□ 1.76
RTFDC1Q9BY42 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.03■■□□□ 1.76
RTFDC1Q9BY42 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.03■■□□□ 1.76
RTFDC1Q9BY42 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.03■■□□□ 1.76
RTFDC1Q9BY42 AC008175.2-201ENST00000612840 297 ntBASIC26.03■■□□□ 1.76
RTFDC1Q9BY42 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTFDC1Q9BY42 AC120498.10-201ENST00000621827 505 ntBASIC26.03■■□□□ 1.76
RTFDC1Q9BY42 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RTFDC1Q9BY42 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTFDC1Q9BY42 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTFDC1Q9BY42 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.03■■□□□ 1.76
RTFDC1Q9BY42 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RTFDC1Q9BY42 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
RTFDC1Q9BY42 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.02■■□□□ 1.76
RTFDC1Q9BY42 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RTFDC1Q9BY42 AC010980.2-201ENST00000587099 1412 ntBASIC26.02■■□□□ 1.76
RTFDC1Q9BY42 RBM17P2-201ENST00000616397 1405 ntBASIC26.02■■□□□ 1.76
RTFDC1Q9BY42 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.02■■□□□ 1.76
RTFDC1Q9BY42 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RTFDC1Q9BY42 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTFDC1Q9BY42 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC26.01■■□□□ 1.75
RTFDC1Q9BY42 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC26.01■■□□□ 1.75
RTFDC1Q9BY42 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC26.01■■□□□ 1.75
RTFDC1Q9BY42 BET1L-207ENST00000529614 560 ntTSL 5 BASIC26.01■■□□□ 1.75
RTFDC1Q9BY42 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC26.01■■□□□ 1.75
RTFDC1Q9BY42 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.01■■□□□ 1.75
RTFDC1Q9BY42 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC26.01■■□□□ 1.75
RTFDC1Q9BY42 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26■■□□□ 1.75
RTFDC1Q9BY42 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26■■□□□ 1.75
RTFDC1Q9BY42 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
RTFDC1Q9BY42 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
RTFDC1Q9BY42 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RTFDC1Q9BY42 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
RTFDC1Q9BY42 GAS7-202ENST00000396115 929 ntTSL 5 BASIC26■■□□□ 1.75
RTFDC1Q9BY42 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26■■□□□ 1.75
RTFDC1Q9BY42 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26■■□□□ 1.75
RTFDC1Q9BY42 AL591742.1-201ENST00000604433 565 ntBASIC26■■□□□ 1.75
RTFDC1Q9BY42 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
RTFDC1Q9BY42 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26■■□□□ 1.75
RTFDC1Q9BY42 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTFDC1Q9BY42 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTFDC1Q9BY42 KRT16P2-201ENST00000414673 1423 ntBASIC25.99■■□□□ 1.75
RTFDC1Q9BY42 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.99■■□□□ 1.75
RTFDC1Q9BY42 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
RTFDC1Q9BY42 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms