Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 AL591742.1-201ENST00000604433 565 ntBASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.01■■□□□ 1.11
COL25A1Q9BXS0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL25A1Q9BXS0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL25A1Q9BXS0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
COL25A1Q9BXS0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL25A1Q9BXS0 POM121L13P-201ENST00000422362 380 ntBASIC22■■□□□ 1.11
COL25A1Q9BXS0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22■■□□□ 1.11
COL25A1Q9BXS0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL25A1Q9BXS0 OR2A1-AS1-207ENST00000486094 819 ntBASIC22■■□□□ 1.11
COL25A1Q9BXS0 AC124016.1-201ENST00000609552 612 ntBASIC22■■□□□ 1.11
COL25A1Q9BXS0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL25A1Q9BXS0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
COL25A1Q9BXS0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 AC004687.1-201ENST00000579003 1625 ntBASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 AP000593.1-201ENST00000393668 712 ntBASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 AC104076.2-201ENST00000448912 469 ntBASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.99■■□□□ 1.11
COL25A1Q9BXS0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL25A1Q9BXS0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL25A1Q9BXS0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL25A1Q9BXS0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL25A1Q9BXS0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL25A1Q9BXS0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.98■■□□□ 1.11
COL25A1Q9BXS0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.98■■□□□ 1.11
COL25A1Q9BXS0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL25A1Q9BXS0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL25A1Q9BXS0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.98■■□□□ 1.11
COL25A1Q9BXS0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
COL25A1Q9BXS0 AC026471.5-201ENST00000615068 467 ntBASIC21.98■■□□□ 1.11
COL25A1Q9BXS0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
COL25A1Q9BXS0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
COL25A1Q9BXS0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL25A1Q9BXS0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 AC133681.1-201ENST00000465482 601 ntBASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 AP003071.4-201ENST00000562276 1284 ntBASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 WWOX-216ENST00000569818 525 ntBASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 AC091076.1-201ENST00000610741 619 ntBASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 AC006538.3-201ENST00000612495 578 ntBASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 AL358472.4-201ENST00000633140 710 ntBASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.97■■□□□ 1.11
COL25A1Q9BXS0 TERF1P1-201ENST00000311003 1181 ntBASIC21.96■■□□□ 1.11
COL25A1Q9BXS0 DUSP5P1-201ENST00000441325 1139 ntBASIC21.96■■□□□ 1.11
COL25A1Q9BXS0 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.96■■□□□ 1.11
COL25A1Q9BXS0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.96■■□□□ 1.11
COL25A1Q9BXS0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL25A1Q9BXS0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL25A1Q9BXS0 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.96■■□□□ 1.11
COL25A1Q9BXS0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.96■■□□□ 1.11
COL25A1Q9BXS0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.96■■□□□ 1.11
COL25A1Q9BXS0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.96■■□□□ 1.11
COL25A1Q9BXS0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL25A1Q9BXS0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL25A1Q9BXS0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL25A1Q9BXS0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL25A1Q9BXS0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL25A1Q9BXS0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL25A1Q9BXS0 AL450487.1-201ENST00000426799 995 ntBASIC21.95■■□□□ 1.1
COL25A1Q9BXS0 AL137013.1-201ENST00000432946 1228 ntBASIC21.95■■□□□ 1.1
COL25A1Q9BXS0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.95■■□□□ 1.1
COL25A1Q9BXS0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.95■■□□□ 1.1
COL25A1Q9BXS0 AL023875.1-201ENST00000640777 796 ntBASIC21.95■■□□□ 1.1
COL25A1Q9BXS0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms