Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RPAP1Q9BWH6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RPAP1Q9BWH6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
RPAP1Q9BWH6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.95■■□□□ 1.74
RPAP1Q9BWH6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.95■■□□□ 1.74
RPAP1Q9BWH6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.95■■□□□ 1.74
RPAP1Q9BWH6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.95■■□□□ 1.74
RPAP1Q9BWH6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RPAP1Q9BWH6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RPAP1Q9BWH6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.94■■□□□ 1.74
RPAP1Q9BWH6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.94■■□□□ 1.74
RPAP1Q9BWH6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.94■■□□□ 1.74
RPAP1Q9BWH6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RPAP1Q9BWH6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.94■■□□□ 1.74
RPAP1Q9BWH6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RPAP1Q9BWH6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RPAP1Q9BWH6 AC079140.4-201ENST00000507448 529 ntBASIC25.94■■□□□ 1.74
RPAP1Q9BWH6 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.94■■□□□ 1.74
RPAP1Q9BWH6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RPAP1Q9BWH6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
RPAP1Q9BWH6 AC104771.1-201ENST00000603335 964 ntBASIC25.94■■□□□ 1.74
RPAP1Q9BWH6 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.94■■□□□ 1.74
RPAP1Q9BWH6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
RPAP1Q9BWH6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
RPAP1Q9BWH6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RPAP1Q9BWH6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RPAP1Q9BWH6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.93■■□□□ 1.74
RPAP1Q9BWH6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RPAP1Q9BWH6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.93■■□□□ 1.74
RPAP1Q9BWH6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.93■■□□□ 1.74
RPAP1Q9BWH6 CROCCP5-201ENST00000436658 830 ntBASIC25.93■■□□□ 1.74
RPAP1Q9BWH6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.93■■□□□ 1.74
RPAP1Q9BWH6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RPAP1Q9BWH6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RPAP1Q9BWH6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RPAP1Q9BWH6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
RPAP1Q9BWH6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
RPAP1Q9BWH6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
RPAP1Q9BWH6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RPAP1Q9BWH6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RPAP1Q9BWH6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
RPAP1Q9BWH6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RPAP1Q9BWH6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RPAP1Q9BWH6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25.92■■□□□ 1.74
RPAP1Q9BWH6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RPAP1Q9BWH6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RPAP1Q9BWH6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RPAP1Q9BWH6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
RPAP1Q9BWH6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
RPAP1Q9BWH6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.91■■□□□ 1.74
RPAP1Q9BWH6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.91■■□□□ 1.74
RPAP1Q9BWH6 C11orf96-202ENST00000528572 1834 ntBASIC25.91■■□□□ 1.74
RPAP1Q9BWH6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RPAP1Q9BWH6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RPAP1Q9BWH6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RPAP1Q9BWH6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.9■■□□□ 1.74
RPAP1Q9BWH6 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.9■■□□□ 1.74
RPAP1Q9BWH6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RPAP1Q9BWH6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.89■■□□□ 1.74
RPAP1Q9BWH6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.89■■□□□ 1.74
RPAP1Q9BWH6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
RPAP1Q9BWH6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RPAP1Q9BWH6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RPAP1Q9BWH6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RPAP1Q9BWH6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
RPAP1Q9BWH6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
RPAP1Q9BWH6 AC006970.2-201ENST00000450065 779 ntBASIC25.89■■□□□ 1.74
RPAP1Q9BWH6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.89■■□□□ 1.74
RPAP1Q9BWH6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.89■■□□□ 1.74
RPAP1Q9BWH6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.89■■□□□ 1.74
RPAP1Q9BWH6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RPAP1Q9BWH6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RPAP1Q9BWH6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RPAP1Q9BWH6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RPAP1Q9BWH6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RPAP1Q9BWH6 AC007375.3-201ENST00000600936 2314 ntBASIC25.88■■□□□ 1.73
RPAP1Q9BWH6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RPAP1Q9BWH6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
RPAP1Q9BWH6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.88■■□□□ 1.73
RPAP1Q9BWH6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RPAP1Q9BWH6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RPAP1Q9BWH6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RPAP1Q9BWH6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.88■■□□□ 1.73
RPAP1Q9BWH6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC25.88■■□□□ 1.73
RPAP1Q9BWH6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RPAP1Q9BWH6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RPAP1Q9BWH6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RPAP1Q9BWH6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
RPAP1Q9BWH6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RPAP1Q9BWH6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RPAP1Q9BWH6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
RPAP1Q9BWH6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RPAP1Q9BWH6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RPAP1Q9BWH6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RPAP1Q9BWH6 MIR663A-201ENST00000385250 93 ntBASIC25.87■■□□□ 1.73
RPAP1Q9BWH6 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.87■■□□□ 1.73
RPAP1Q9BWH6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RPAP1Q9BWH6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.87■■□□□ 1.73
RPAP1Q9BWH6 AC005224.4-201ENST00000583262 1652 ntBASIC25.87■■□□□ 1.73
RPAP1Q9BWH6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms