Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 TSPY26P-201ENST00000476365 1326 ntBASIC19.67■□□□□ 0.74
ZNF559Q9BR84 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ZNF559Q9BR84 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ZNF559Q9BR84 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
ZNF559Q9BR84 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ZNF559Q9BR84 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
ZNF559Q9BR84 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.65■□□□□ 0.74
ZNF559Q9BR84 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF559Q9BR84 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF559Q9BR84 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.65■□□□□ 0.74
ZNF559Q9BR84 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF559Q9BR84 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF559Q9BR84 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.65■□□□□ 0.74
ZNF559Q9BR84 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF559Q9BR84 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.65■□□□□ 0.74
ZNF559Q9BR84 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.65■□□□□ 0.74
ZNF559Q9BR84 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF559Q9BR84 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF559Q9BR84 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF559Q9BR84 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.64■□□□□ 0.74
ZNF559Q9BR84 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZNF559Q9BR84 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF559Q9BR84 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF559Q9BR84 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF559Q9BR84 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.64■□□□□ 0.73
ZNF559Q9BR84 AL358852.1-201ENST00000623174 1268 ntBASIC19.64■□□□□ 0.73
ZNF559Q9BR84 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF559Q9BR84 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF559Q9BR84 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF559Q9BR84 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ZNF559Q9BR84 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.64■□□□□ 0.73
ZNF559Q9BR84 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.64■□□□□ 0.73
ZNF559Q9BR84 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF559Q9BR84 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
ZNF559Q9BR84 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF559Q9BR84 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ZNF559Q9BR84 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF559Q9BR84 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF559Q9BR84 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF559Q9BR84 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF559Q9BR84 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF559Q9BR84 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF559Q9BR84 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF559Q9BR84 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
ZNF559Q9BR84 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ZNF559Q9BR84 AC004911.1-201ENST00000416316 871 ntBASIC19.62■□□□□ 0.73
ZNF559Q9BR84 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF559Q9BR84 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.62■□□□□ 0.73
ZNF559Q9BR84 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ZNF559Q9BR84 DUX4L2-201ENST00000561772 1275 ntBASIC19.62■□□□□ 0.73
ZNF559Q9BR84 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
ZNF559Q9BR84 DUX4L6-201ENST00000626483 1275 ntBASIC19.62■□□□□ 0.73
ZNF559Q9BR84 DUX4L1-201ENST00000627662 1275 ntBASIC19.62■□□□□ 0.73
ZNF559Q9BR84 DUX4L8-201ENST00000629013 1275 ntBASIC19.62■□□□□ 0.73
ZNF559Q9BR84 DUX4L3-201ENST00000630187 1275 ntBASIC19.62■□□□□ 0.73
ZNF559Q9BR84 DUX4L7-201ENST00000630678 1275 ntBASIC19.62■□□□□ 0.73
ZNF559Q9BR84 DUX4L5-201ENST00000630834 1275 ntBASIC19.62■□□□□ 0.73
ZNF559Q9BR84 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.62■□□□□ 0.73
ZNF559Q9BR84 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms